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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 354.5
Min RPKM: 65.9
Std RPKM: 62.9
Median RPKM: 171.8
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
354.5
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
349.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
320.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
308.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
307.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
305.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
299.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
294.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
276.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
272.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
270.6
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
263.2
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
262.2
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
260.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
254.3
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
254.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
253.7
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
250.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
241.5
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
239.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
235.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
233.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
231.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
230.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
224.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
220.0
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
219.2
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
218.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
217.6
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
213.3
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
212.1
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
209.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
209.1
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
199.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
196.6
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
184.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
181.7
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
180.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
180.0
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
179.9
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
178.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
178.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
176.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
175.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
174.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
173.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
172.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
171.2
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
171.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
169.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
168.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
168.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
167.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
165.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
164.5
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
160.3
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
159.1
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
153.4
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
151.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
150.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
149.6
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
149.5
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
148.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
148.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
146.8
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
145.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
143.3
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
143.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
139.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
139.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
138.3
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
137.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
135.9
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
135.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
134.9
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
133.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
131.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
131.1
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
129.3
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
125.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
124.5
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
121.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
118.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
115.4
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
113.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
113.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
105.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
105.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
102.5
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
101.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
97.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
88.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
88.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
65.9
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.