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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 286.7
Min RPKM: 94.4
Std RPKM: 41.4
Median RPKM: 188.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
286.7
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
269.1
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
261.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
260.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
253.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
250.2
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
248.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
246.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
243.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
243.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
243.1
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
237.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
237.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
236.8
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
236.1
GTEX-X585-1826-SM-4QAS3
50-59 years, male
232.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
232.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
231.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
230.0
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
229.9
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
229.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
229.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
228.7
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
228.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
225.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
223.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
221.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
221.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
219.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
218.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
218.2
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
217.6
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
213.5
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
213.2
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
212.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
211.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
211.1
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
210.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
206.5
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
206.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
201.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
199.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
197.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
195.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
195.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
194.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
193.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
192.3
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
191.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
190.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
189.5
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
188.6
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
188.3
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
187.3
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
186.9
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
186.3
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
186.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
185.6
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
185.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
181.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
178.8
GTEX-13111-0126-SM-5EGHO
50-59 years, male
177.3
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
176.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
171.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
171.9
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
171.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
170.5
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
170.4
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
169.1
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
169.0
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
168.6
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
168.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
167.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
164.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
163.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
162.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
160.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
160.4
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
159.4
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
158.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
158.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
157.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
155.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
153.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
151.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
150.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
149.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
146.3
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
145.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
145.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
143.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
142.5
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
139.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
137.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
132.6
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
127.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
119.0
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
117.4
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
116.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
115.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
108.6
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
104.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
97.0
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
94.4
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.