We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 274.6
Min RPKM: 20.7
Std RPKM: 57.9
Median RPKM: 78.2
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
274.6
GTEX-1192X-2526-SM-59868
50-59 years, male
265.4
GTEX-117YX-0326-SM-5GICL
50-59 years, male
256.1
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
252.6
GTEX-13111-1426-SM-5DUW3
50-59 years, male
210.2
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
205.9
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
204.9
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
201.8
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
176.5
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
167.0
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
166.0
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
165.0
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
164.0
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
162.3
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
156.4
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
155.7
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
138.8
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
138.4
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
137.8
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
136.4
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
136.2
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
129.8
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
129.4
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
126.0
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
125.5
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
120.9
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
118.8
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
117.8
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
114.2
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
108.9
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
108.3
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
104.4
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
103.2
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
101.3
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
99.9
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
95.6
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
92.6
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
90.1
GTEX-13O61-1326-SM-5KM31
60-69 years, male
86.1
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
84.5
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
83.3
GTEX-13113-1226-SM-5EGHT
60-69 years, female
81.3
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
79.5
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
78.7
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
77.8
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
74.5
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
74.2
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
71.5
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
70.8
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
69.6
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
69.3
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
68.0
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
66.1
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
64.2
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
63.9
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
63.8
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
63.8
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
61.8
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
61.3
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
61.1
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
59.7
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
59.3
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
56.1
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
55.8
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
55.0
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
53.6
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
52.6
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
51.9
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
51.6
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
50.6
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
50.6
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
50.1
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
49.9
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
49.9
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
47.5
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
45.6
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
45.5
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
45.2
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
44.3
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
43.4
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
43.3
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
40.9
GTEX-ZTSS-0926-SM-59865
40-49 years, male
39.9
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
39.2
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
38.0
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
35.4
GTEX-1122O-1326-SM-5H11F
60-69 years, female
31.2
GTEX-111YS-1426-SM-5GID8
60-69 years, male
20.7
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.