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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 607.3
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 349.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 219
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 411.2
Min RPKM: 115.9
Std RPKM: 50.9
Median RPKM: 210.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
411.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
347.6
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
339.9
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
338.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
334.6
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
328.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
326.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
325.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
318.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
316.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
316.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
306.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
304.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
301.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
300.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
300.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
298.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
298.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
298.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
298.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
296.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
295.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
293.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
291.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
290.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
289.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
288.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
287.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
285.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
272.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
271.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
270.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
269.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
268.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
267.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
267.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
266.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
266.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
262.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
262.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
261.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
261.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
261.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
261.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
260.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
259.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
258.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
257.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
257.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
257.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
256.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
255.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
255.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
255.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
254.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
254.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
253.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
253.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
253.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
252.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
252.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
252.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
249.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
249.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
249.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
246.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
245.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
245.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
245.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
243.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
242.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
241.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
241.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
238.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
238.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
238.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
238.4
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
237.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
234.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
231.9
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
231.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
231.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
230.5
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
229.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
228.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
228.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
226.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
225.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
225.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
225.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
224.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
223.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
222.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
222.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
219.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
219.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
218.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
217.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
214.8
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
214.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
214.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
213.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
212.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
212.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
211.2
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
211.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
211.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
210.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
209.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
209.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
209.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
209.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
209.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
209.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
207.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
207.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
207.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
206.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
206.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
205.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
205.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
205.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
204.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
204.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
203.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
203.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
203.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
203.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
203.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
202.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
201.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
200.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
200.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
199.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
199.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
198.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
197.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
196.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
196.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
196.0
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
195.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
195.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
194.5
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
194.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
193.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
193.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
193.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
192.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
191.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
190.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
186.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
186.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
186.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
186.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
185.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
185.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
184.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
183.8
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
183.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
181.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
181.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
181.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
181.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
181.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
181.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
180.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
179.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
179.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
179.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
177.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
177.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
176.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
176.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
175.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
174.6
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
174.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
173.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
172.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
172.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
171.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
170.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
170.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
169.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
169.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
166.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
166.9
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
165.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
162.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
162.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
162.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
160.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
160.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
159.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
159.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
156.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
156.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
153.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
152.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
152.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
151.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
150.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
147.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
144.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
143.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
143.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
141.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
140.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
138.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
137.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
137.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
133.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
132.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
131.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
115.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.