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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 7000.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 5336
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 404.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3381.3
Min RPKM: 0.0
Std RPKM: 339.8
Median RPKM: 29.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
3381.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
2293.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
1169.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
1112.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1011.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
955.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
810.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
792.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
732.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
725.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
676.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
662.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
644.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
589.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
576.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
495.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
471.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
466.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
449.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
447.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
385.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
377.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
371.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
357.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
354.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
319.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
313.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
312.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
309.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
296.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
286.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
286.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
274.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
272.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
270.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
270.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
267.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
262.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
251.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
248.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
246.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
246.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
245.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
240.5
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
239.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
224.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
224.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
208.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
207.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
197.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
194.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
177.0
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
171.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
161.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
159.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
154.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
150.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
148.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
145.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
135.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
134.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
132.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
132.3
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
130.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
127.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
123.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
119.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
116.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
116.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
114.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
114.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
111.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
109.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
106.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
96.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
94.7
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
91.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
88.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
86.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
84.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
80.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
74.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
73.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
71.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
66.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
64.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
62.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
61.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
58.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
54.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
54.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
54.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
54.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
52.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
46.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
45.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
45.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
42.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
40.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
37.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
37.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
35.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
34.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
33.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
32.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
31.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
29.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
29.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
28.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
27.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
27.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
26.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
26.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
24.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
23.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
22.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
21.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
20.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
20.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
20.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
20.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
19.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
19.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
18.5
GTEX-111YS-1926-SM-5GICC
60-69 years, male
11.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
11.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
10.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
8.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
8.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
7.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
6.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
6.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
6.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
5.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
4.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
4.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
3.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
3.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
2.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
1.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
1.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
0.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
0.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
0.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
0.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
0.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
0.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
0.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
0.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
0.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
0.1
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
0.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
0.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
0.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
0.1
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
0.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
0.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
0.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
0.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
0.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
0.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
0.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
0.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
0.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
0.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
0.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
0.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
0.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
0.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
0.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
0.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
0.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
0.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
0.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
0.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
0.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
0.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
0.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
0.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
0.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
0.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
0.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
0.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
0.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
0.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
0.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
0.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
0.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
0.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
0.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
0.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
0.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
0.0
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
0.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
0.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
0.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
0.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
0.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
0.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
0.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
0.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
0.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
0.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
0.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
0.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
0.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
0.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
0.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
0.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
0.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
0.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
0.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
0.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
0.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.