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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 27.7
Min RPKM: 3.2
Std RPKM: 4.1
Median RPKM: 10.8
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
27.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
20.8
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
20.8
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
19.9
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
18.6
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
18.4
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
17.6
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
17.3
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
16.5
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
16.5
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
16.3
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
15.6
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
15.0
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
14.9
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
14.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
14.8
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
14.7
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
14.3
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
14.2
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
14.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
13.8
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
13.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
13.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
13.0
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
13.0
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
12.9
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
12.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
12.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
12.7
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
12.5
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
12.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
12.2
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
12.2
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
12.2
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
12.1
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
12.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
12.1
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
12.0
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
12.0
GTEX-P78B-1926-SM-3P616
40-49 years, female
11.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
11.7
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
11.6
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
11.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
11.3
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
11.1
GTEX-RU72-2226-SM-46MUE
50-59 years, female
11.0
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
10.9
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
10.8
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
10.8
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
10.7
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
10.7
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
10.5
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
10.4
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
10.3
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
10.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
10.0
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
10.0
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
9.8
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
9.8
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
9.7
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
9.4
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
9.2
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
8.9
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
8.9
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
8.8
GTEX-S32W-1226-SM-4AD67
50-59 years, female
8.7
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
8.6
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
8.5
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
8.5
GTEX-S341-0726-SM-4AD5R
40-49 years, female
8.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
8.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
7.9
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
7.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
7.8
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
7.7
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
7.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
7.4
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
7.4
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
7.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
7.3
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
7.3
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
7.2
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
7.1
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
7.0
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
6.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
6.5
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
6.2
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
6.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
6.0
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
5.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
5.8
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
5.4
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
4.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
4.4
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
4.0
GTEX-11I78-1926-SM-59878
50-59 years, female
3.9
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
3.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.