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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 8294.9
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 4554.1
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 5001.5
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 8094.6
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 6962.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 17163.4
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 7385.7
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 14139.7
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 10561.7
Min RPKM: 904.2
Std RPKM: 2153.7
Median RPKM: 4024.0
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
10561.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
10545.4
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
9497.4
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
8868.0
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
8709.6
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
8302.0
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
8223.8
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
8179.1
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
8059.9
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
7606.2
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
7328.0
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
7032.4
GTEX-RN64-1826-SM-48FDV
50-59 years, male
6910.4
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
6899.2
GTEX-11ZUS-2526-SM-59872
30-39 years, male
6828.4
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
6734.8
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
6709.8
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
6556.4
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
6365.7
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
6291.9
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
6200.6
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
6169.3
GTEX-YECK-1926-SM-4W21H
60-69 years, male
6162.3
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
6090.0
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
6019.9
GTEX-RU72-1426-SM-46MUF
50-59 years, female
6016.1
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
5954.9
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
5949.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
5928.5
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
5923.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
5800.5
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
5740.2
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
5734.8
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
5691.1
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
5631.7
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
5629.2
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
5572.0
GTEX-13113-1326-SM-5GCOI
60-69 years, female
5395.8
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
5370.0
GTEX-12696-0826-SM-5EGGE
60-69 years, male
5117.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
5113.6
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
5083.2
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
5042.7
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
5015.4
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
4916.2
GTEX-REY6-1226-SM-48FDR
60-69 years, male
4863.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
4842.7
GTEX-1399T-0826-SM-5IFES
60-69 years, male
4832.7
GTEX-P78B-1326-SM-3P611
40-49 years, female
4777.1
GTEX-13112-1426-SM-5EGH8
50-59 years, male
4751.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
4685.4
GTEX-11GSP-0626-SM-5986T
60-69 years, female
4642.2
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
4607.5
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
4340.0
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
4307.7
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
4264.5
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
4224.8
GTEX-R53T-0326-SM-48FEC
50-59 years, female
4175.8
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
4159.5
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
4024.0
GTEX-QEL4-1226-SM-447A4
50-59 years, male
4000.9
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
3989.7
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
3922.2
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
3833.3
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
3823.7
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
3749.4
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
3699.7
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
3616.1
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
3568.5
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
3556.6
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
3552.8
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
3509.0
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
3501.7
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
3500.0
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
3495.0
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
3466.6
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
3412.8
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
3377.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
3310.0
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
3272.4
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
3143.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
3090.5
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
3088.1
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
3085.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
3041.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
2961.7
GTEX-X261-1726-SM-4PQYT
50-59 years, male
2954.3
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
2918.9
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
2830.0
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
2771.6
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
2715.6
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
2657.8
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
2549.8
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
2506.8
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
2431.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
2395.5
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
2271.7
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
2124.9
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
2060.1
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
1949.7
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
1907.1
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
1788.5
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
1752.5
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
1686.4
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
1674.5
GTEX-S33H-1626-SM-4AD68
30-39 years, male
1582.6
GTEX-Q734-0326-SM-48U15
40-49 years, female
1579.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
1500.3
GTEX-S32W-1926-SM-4AD63
50-59 years, female
1490.7
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
1483.7
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
1481.2
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
1443.2
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
1408.0
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
1354.4
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
1241.7
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
1141.0
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
1053.8
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
965.3
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
904.2
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
