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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 222.4
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 147.4
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 93.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 182.5
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 157.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 342.1
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 258.6
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 766.1
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 659.3
Min RPKM: 19.7
Std RPKM: 108.4
Median RPKM: 179.0
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
659.3
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
618.1
GTEX-RU72-1426-SM-46MUF
50-59 years, female
484.3
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
462.9
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
413.3
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
385.0
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
377.0
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
376.3
GTEX-R53T-0326-SM-48FEC
50-59 years, female
341.2
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
338.6
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
334.7
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
307.8
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
303.2
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
298.1
GTEX-13113-1326-SM-5GCOI
60-69 years, female
292.5
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
283.6
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
281.4
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
280.9
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
280.8
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
278.6
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
271.7
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
267.3
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
263.9
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
261.9
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
256.3
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
255.1
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
255.1
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
251.8
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
249.1
GTEX-YECK-1926-SM-4W21H
60-69 years, male
248.6
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
245.7
GTEX-P78B-1326-SM-3P611
40-49 years, female
245.0
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
243.9
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
242.3
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
240.8
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
236.6
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
232.9
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
232.5
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
230.8
GTEX-QEL4-1226-SM-447A4
50-59 years, male
226.3
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
223.0
GTEX-X261-1726-SM-4PQYT
50-59 years, male
223.0
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
217.5
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
217.0
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
214.4
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
210.6
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
210.1
GTEX-RN64-1826-SM-48FDV
50-59 years, male
207.4
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
205.4
GTEX-1399T-0826-SM-5IFES
60-69 years, male
203.9
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
203.6
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
198.2
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
197.6
GTEX-QESD-2026-SM-447BI
20-29 years, male
194.6
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
194.5
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
194.1
GTEX-S32W-1926-SM-4AD63
50-59 years, female
186.0
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
179.7
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
179.7
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
179.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
178.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
175.6
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
175.4
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
174.2
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
170.8
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
170.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
167.4
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
166.3
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
165.6
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
165.4
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
163.4
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
161.8
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
154.6
GTEX-11ZUS-2526-SM-59872
30-39 years, male
154.4
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
154.3
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
153.5
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
146.3
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
146.2
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
145.3
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
142.1
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
141.4
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
139.4
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
138.8
GTEX-12696-0826-SM-5EGGE
60-69 years, male
137.8
GTEX-13112-1426-SM-5EGH8
50-59 years, male
132.6
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
131.0
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
130.8
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
129.4
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
127.8
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
124.4
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
124.0
GTEX-S33H-1626-SM-4AD68
30-39 years, male
123.8
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
119.6
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
117.3
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
115.8
GTEX-REY6-1226-SM-48FDR
60-69 years, male
114.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
109.4
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
98.3
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
93.3
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
89.5
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
87.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
83.4
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
80.6
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
80.5
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
80.2
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
79.4
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
69.8
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
66.2
GTEX-Q734-0326-SM-48U15
40-49 years, female
63.7
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
63.3
GTEX-11GSP-0626-SM-5986T
60-69 years, female
60.9
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
56.2
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
49.6
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
49.2
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
44.9
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
39.2
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
30.4
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
25.9
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
19.7
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
