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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 153.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 122.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 83.8
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 202.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 190.2
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 156.5
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 83.8
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 134.2
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 142.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 366.4
Min RPKM: 63.5
Std RPKM: 63.5
Median RPKM: 221.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
366.4
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
365.6
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
363.2
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
349.0
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
348.4
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
348.0
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
330.0
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
327.7
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
323.4
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
323.2
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
317.9
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
315.8
GTEX-S95S-1126-SM-4B64E
60-69 years, male
307.8
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
302.4
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
299.1
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
298.7
GTEX-Y111-2426-SM-4TT23
50-59 years, male
298.4
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
295.5
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
294.7
GTEX-REY6-0126-SM-48FDT
60-69 years, male
294.4
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
292.8
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
289.6
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
287.5
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
284.4
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
283.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
282.0
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
280.7
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
280.6
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
276.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
276.6
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
276.1
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
276.0
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
274.5
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
274.4
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
273.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
273.7
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
272.1
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
270.2
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
267.4
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
265.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
264.8
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
264.6
GTEX-13112-0226-SM-5P9IV
50-59 years, male
264.2
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
263.8
GTEX-11OF3-1826-SM-5987N
60-69 years, male
263.7
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
263.3
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
262.3
GTEX-R55D-0126-SM-48FEL
50-59 years, male
261.6
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
260.4
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
260.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
255.1
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
252.6
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
252.4
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
251.7
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
250.9
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
250.9
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
250.3
GTEX-12696-0226-SM-5EGL3
60-69 years, male
250.2
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
249.8
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
245.1
GTEX-QLQW-1026-SM-447A9
30-39 years, male
244.3
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
244.3
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
243.6
GTEX-V955-1926-SM-4KL1L
60-69 years, male
243.5
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
242.2
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
242.0
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
241.5
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
240.3
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
239.3
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
239.1
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
238.0
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
238.0
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
237.1
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
236.2
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
235.9
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
234.3
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
234.1
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
231.0
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
230.7
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
229.2
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
228.9
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
228.8
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
225.5
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
224.8
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
223.3
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
222.4
GTEX-XPT6-1626-SM-4B655
20-29 years, male
220.9
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
220.0
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
219.6
GTEX-13111-1526-SM-5EGJX
50-59 years, male
216.9
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
216.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
215.0
GTEX-R55C-1426-SM-48FED
40-49 years, male
214.9
GTEX-X261-2326-SM-4PQYU
50-59 years, male
213.7
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
212.1
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
211.7
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
211.5
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
211.2
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
211.0
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
210.3
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
209.5
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
207.0
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
206.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
205.5
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
203.2
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
202.3
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
200.8
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
199.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
198.8
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
197.9
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
196.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
196.1
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
195.7
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
193.2
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
193.2
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
193.1
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
191.9
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
190.1
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
189.5
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
188.6
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
187.9
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
186.5
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
183.5
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
180.7
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
180.5
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
180.1
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
180.1
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
176.9
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
176.4
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
175.5
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
174.2
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
174.1
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
173.9
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
170.3
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
165.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
164.2
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
163.3
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
162.3
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
159.8
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
157.9
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
157.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
152.7
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
151.9
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
150.7
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
148.9
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
146.6
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
146.3
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
145.4
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
143.1
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
140.0
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
139.4
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
137.5
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
136.4
GTEX-RN64-2326-SM-48FDW
50-59 years, male
136.0
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
133.5
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
129.6
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
124.3
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
124.3
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
121.8
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
119.4
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
115.5
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
113.6
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
112.8
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
111.8
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
109.7
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
107.8
GTEX-S33H-0126-SM-4AD62
30-39 years, male
97.8
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
95.2
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
88.9
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
87.7
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
87.1
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
63.5
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.