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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 555.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 711.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 780.4
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 668.8
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 610.2
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 624.3
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 973.9
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 652.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 762.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 375.7
Min RPKM: 80.4
Std RPKM: 60.2
Median RPKM: 205.2
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
375.7
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
371.7
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
349.2
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
346.9
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
340.5
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
339.3
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
326.8
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
324.3
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
323.9
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
319.5
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
315.7
GTEX-XPT6-1626-SM-4B655
20-29 years, male
312.6
GTEX-V955-1926-SM-4KL1L
60-69 years, male
311.1
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
304.3
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
299.6
GTEX-S33H-0126-SM-4AD62
30-39 years, male
295.9
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
290.6
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
288.8
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
288.5
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
288.0
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
284.9
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
284.2
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
283.5
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
283.1
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
283.1
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
281.7
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
279.9
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
278.4
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
276.5
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
271.7
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
270.2
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
269.5
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
267.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
266.4
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
265.7
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
263.7
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
261.7
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
261.4
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
260.1
GTEX-QLQW-1026-SM-447A9
30-39 years, male
256.6
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
254.6
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
252.9
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
252.5
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
250.6
GTEX-R55C-1426-SM-48FED
40-49 years, male
249.9
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
249.9
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
249.3
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
249.0
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
246.8
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
243.9
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
243.9
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
242.6
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
242.6
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
242.2
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
241.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
240.6
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
240.5
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
240.2
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
239.6
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
239.2
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
238.4
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
234.1
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
233.9
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
233.5
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
233.3
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
233.2
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
232.5
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
229.4
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
229.3
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
228.2
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
225.7
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
224.2
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
224.2
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
223.0
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
220.6
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
220.1
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
219.8
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
217.9
GTEX-S95S-1126-SM-4B64E
60-69 years, male
216.4
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
215.9
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
212.7
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
209.9
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
207.8
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
207.1
GTEX-13112-0226-SM-5P9IV
50-59 years, male
206.8
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
205.5
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
204.9
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
204.6
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
204.4
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
204.0
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
203.6
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
203.5
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
203.2
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
202.5
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
201.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
201.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
201.1
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
200.8
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
200.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
200.1
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
199.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
199.3
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
198.9
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
198.3
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
197.9
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
195.9
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
194.8
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
194.1
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
194.1
GTEX-117XS-2026-SM-5GID1
60-69 years, male
193.2
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
191.0
GTEX-11DXZ-2126-SM-59881
50-59 years, male
189.3
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
187.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
183.3
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
183.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
181.1
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
180.5
GTEX-RN64-2326-SM-48FDW
50-59 years, male
180.4
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
178.5
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
177.9
GTEX-13111-1526-SM-5EGJX
50-59 years, male
176.4
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
173.9
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
173.4
GTEX-11OF3-1826-SM-5987N
60-69 years, male
173.3
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
173.0
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
171.7
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
171.3
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
168.9
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
168.8
GTEX-Y111-2426-SM-4TT23
50-59 years, male
168.7
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
168.3
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
166.3
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
165.9
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
164.4
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
164.3
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
163.2
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
162.0
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
161.6
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
161.1
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
160.9
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
160.6
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
159.1
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
156.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
156.1
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
155.1
GTEX-REY6-0126-SM-48FDT
60-69 years, male
154.4
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
151.0
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
150.4
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
145.0
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
144.8
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
143.7
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
139.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
138.2
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
136.0
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
130.9
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
130.6
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
130.5
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
127.5
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
126.6
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
126.2
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
125.6
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
124.7
GTEX-X261-2326-SM-4PQYU
50-59 years, male
122.8
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
116.6
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
116.0
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
115.1
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
114.5
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
112.6
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
110.5
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
99.4
GTEX-12696-0226-SM-5EGL3
60-69 years, male
98.2
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
80.4
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.