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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 569.5
Min RPKM: 90.2
Std RPKM: 82.1
Median RPKM: 200.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
569.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
534.7
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
477.4
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
475.5
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
402.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
362.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
349.2
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
337.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
334.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
323.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
292.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
288.3
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
286.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
284.5
GTEX-144GN-2126-SM-5O99D
50-59 years, male
284.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
276.3
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
272.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
271.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
271.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
267.4
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
264.6
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
258.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
257.4
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
255.5
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
252.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
239.3
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
239.1
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
237.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
236.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
234.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
233.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
232.3
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
221.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
221.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
218.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
218.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
217.9
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
217.9
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
216.6
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
215.4
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
214.1
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
213.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
213.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
210.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
207.6
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
207.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
207.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
206.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
205.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
203.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
202.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
200.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
200.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
199.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
198.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
198.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
197.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
195.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
195.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
193.9
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
193.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
192.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
188.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
188.1
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
183.8
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
183.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
181.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
181.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
180.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
180.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
179.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
178.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
178.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
177.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
177.5
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
176.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
173.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
172.0
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
171.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
169.6
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
169.0
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
162.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
162.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
161.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
160.3
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
160.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
159.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
156.3
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
154.9
GTEX-X585-1826-SM-4QAS3
50-59 years, male
149.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
149.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
148.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
148.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
146.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
144.1
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
135.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
135.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
126.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
126.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
125.3
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
122.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
112.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
94.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
90.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.