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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 736.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 299.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 199.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 859.6
Min RPKM: 19.3
Std RPKM: 121.2
Median RPKM: 101.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
859.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
735.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
583.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
551.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
533.5
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
456.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
446.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
373.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
372.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
371.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
366.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
364.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
362.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
352.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
351.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
345.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
342.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
339.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
326.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
323.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
316.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
305.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
303.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
300.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
294.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
291.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
282.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
272.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
269.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
263.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
258.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
256.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
248.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
243.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
241.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
241.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
230.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
215.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
214.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
214.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
207.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
207.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
206.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
204.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
202.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
201.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
190.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
187.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
186.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
183.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
183.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
181.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
177.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
176.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
173.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
173.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
172.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
169.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
168.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
166.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
165.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
163.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
160.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
158.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
158.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
153.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
150.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
150.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
150.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
149.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
147.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
146.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
146.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
142.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
140.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
139.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
138.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
136.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
135.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
135.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
133.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
132.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
129.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
128.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
127.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
127.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
127.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
119.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
118.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
116.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
115.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
114.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
112.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
112.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
110.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
110.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
110.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
109.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
107.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
106.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
106.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
106.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
106.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
105.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
105.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
102.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
101.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
101.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
100.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
100.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
99.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
99.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
99.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
98.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
97.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
97.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
97.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
96.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
96.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
96.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
96.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
95.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
95.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
93.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
92.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
90.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
90.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
90.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
90.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
89.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
88.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
87.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
87.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
85.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
85.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
84.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
84.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
84.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
82.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
82.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
81.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
81.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
81.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
80.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
80.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
80.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
79.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
78.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
78.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
78.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
78.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
77.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
76.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
75.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
74.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
74.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
73.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
72.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
71.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
71.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
71.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
70.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
70.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
70.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
69.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
69.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
68.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
68.5
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
67.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
67.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
67.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
66.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
65.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
63.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
63.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
61.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
60.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
60.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
58.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
58.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
57.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
55.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
55.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
54.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
54.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
54.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
54.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
53.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
52.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
52.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
49.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
48.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
48.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
47.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
46.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
46.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
45.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
44.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
44.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
39.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
39.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
39.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
38.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
38.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
37.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
36.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
36.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
36.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
35.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
34.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
33.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
32.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
22.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
19.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.