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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 46.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 14.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 4.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 207.2
Min RPKM: 10.9
Std RPKM: 40.0
Median RPKM: 85.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
207.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
200.8
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
200.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
198.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
181.6
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
170.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
170.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
169.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
168.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
168.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
162.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
162.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
162.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
160.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
155.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
155.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
155.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
154.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
153.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
153.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
152.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
146.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
145.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
145.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
144.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
143.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
142.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
140.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
139.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
137.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
137.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
135.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
134.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
133.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
130.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
129.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
129.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
129.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
128.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
128.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
127.6
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
127.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
126.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
122.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
122.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
122.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
121.7
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
121.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
121.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
119.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
119.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
119.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
118.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
117.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
116.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
116.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
116.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
114.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
114.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
113.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
111.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
111.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
109.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
109.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
108.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
106.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
105.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
105.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
105.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
104.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
103.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
102.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
102.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
102.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
101.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
101.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
100.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
100.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
100.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
100.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
100.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
98.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
98.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
97.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
96.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
96.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
96.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
96.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
95.6
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
94.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
94.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
94.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
94.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
93.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
92.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
91.4
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
91.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
90.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
90.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
90.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
89.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
89.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
89.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
89.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
87.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
86.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
86.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
85.4
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
84.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
84.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
83.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
83.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
83.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
83.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
83.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
83.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
82.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
82.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
82.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
82.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
81.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
81.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
80.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
80.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
79.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
79.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
79.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
79.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
79.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
78.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
78.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
78.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
78.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
78.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
77.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
76.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
76.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
76.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
75.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
75.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
75.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
74.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
74.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
74.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
74.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
73.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
69.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
69.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
69.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
69.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
68.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
66.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
65.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
64.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
64.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
64.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
64.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
64.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
63.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
63.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
62.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
62.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
62.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
61.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
61.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
61.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
60.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
60.0
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
58.5
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
58.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
57.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
55.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
54.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
53.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
53.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
51.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
50.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
50.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
50.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
50.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
50.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
49.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
48.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
48.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
48.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
47.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
46.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
45.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
45.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
43.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
43.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
42.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
42.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
41.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
38.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
37.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
36.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
35.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
35.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
32.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
32.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
31.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
30.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
30.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
30.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
29.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
29.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
27.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
23.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
22.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
22.1
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
20.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
17.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
10.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.