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FRG1
COLON - Expression summary
RNA expressioni
HPA:6.2TPM
GTEx:13.6RPKM
FANTOM5:49.4Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 6.2
overview Male, age 54 Sample 1
TPM: 6.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 6.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 7.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 13.6
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 15.6
Samples: 149

Max RPKM: 34.2
Min RPKM: 7.3
Std RPKM: 3.1
Median RPKM: 15.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 34.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 25.7
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 22.2
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 22.0
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 22.0
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 21.9
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 21.0
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 20.4
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 20.2
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 20.1
Show all
Colon - Transverse
RPKM: 12.0
Samples: 196

Max RPKM: 22.1
Min RPKM: 6.0
Std RPKM: 3.1
Median RPKM: 11.3
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 22.1
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 22.1
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 20.4
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 19.1
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 19.0
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 18.9
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 18.7
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 18.7
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 18.7
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 18.6
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 49.4
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 52.2
FF:10014-101C5 62,83,84 years, mixed 49.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.