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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 387.9
Min RPKM: 66.7
Std RPKM: 57.8
Median RPKM: 160.2
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
387.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
331.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
293.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
289.4
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
283.2
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
278.6
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
270.7
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
265.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
264.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
254.5
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
249.6
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
244.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
241.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
239.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
226.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
214.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
211.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
211.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
206.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
206.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
201.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
195.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
194.1
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
193.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
187.9
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
184.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
182.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
182.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
181.6
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
180.5
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
180.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
179.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
177.4
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
174.3
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
174.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
172.7
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
171.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
171.5
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
167.9
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
167.5
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
165.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
164.7
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
164.3
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
164.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
162.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
161.0
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
160.3
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
160.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
159.6
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
158.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
157.7
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
155.6
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
154.5
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
150.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
149.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
145.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
145.5
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
145.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
142.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
140.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
138.6
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
137.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
136.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
135.5
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
133.5
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
132.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
130.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
129.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
128.9
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
128.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
128.8
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
127.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
125.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
124.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
123.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
122.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
122.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
119.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
119.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
117.5
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
117.1
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
116.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
115.9
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
113.7
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
104.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
102.4
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
101.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
100.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
99.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
95.7
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
93.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
85.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
78.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
66.7
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.