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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 732.1
Min RPKM: 34.2
Std RPKM: 139.4
Median RPKM: 254.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
732.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
686.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
645.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
548.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
489.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
489.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
472.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
463.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
430.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
409.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
389.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
387.2
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
382.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
379.5
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
371.9
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
369.3
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
368.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
363.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
352.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
348.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
345.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
344.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
341.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
341.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
335.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
334.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
330.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
325.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
322.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
315.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
313.3
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
304.6
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
302.3
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
296.6
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
287.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
286.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
285.5
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
284.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
281.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
276.4
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
275.1
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
274.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
272.6
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
267.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
266.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
258.3
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
255.0
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
253.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
237.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
236.2
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
230.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
226.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
217.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
214.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
205.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
205.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
199.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
197.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
197.2
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
191.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
191.3
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
189.0
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
185.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
181.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
180.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
179.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
178.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
174.0
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
172.9
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
171.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
169.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
161.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
150.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
149.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
129.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
129.1
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
128.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
123.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
112.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
110.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
108.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
105.5
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
85.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
79.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
77.4
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
73.2
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
71.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
71.5
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
64.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
63.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
61.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
55.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
40.5
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
34.2
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.