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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 916.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 611.4
Min RPKM: 100.2
Std RPKM: 86.1
Median RPKM: 272.9
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
611.4
GTEX-11GSP-3226-SM-5986O
60-69 years, female
506.8
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
497.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
479.1
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
450.8
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
428.4
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
417.5
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
416.0
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
391.9
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
383.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
380.2
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
376.7
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
376.4
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
361.7
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
360.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
354.6
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
353.4
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
352.7
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
350.7
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
338.9
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
332.0
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
327.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
326.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
324.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
323.4
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
321.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
320.8
GTEX-1128S-2726-SM-5H12C
60-69 years, female
320.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
317.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
317.5
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
317.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
317.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
315.6
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
312.3
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
311.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
311.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
307.9
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
307.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
305.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
304.8
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
302.8
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
300.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
299.4
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
297.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
297.4
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
297.2
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
294.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
290.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
286.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
286.6
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
285.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
279.0
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
277.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
277.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
276.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
275.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
274.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
271.7
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
270.3
GTEX-145MF-2726-SM-5O995
50-59 years, male
268.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
267.7
GTEX-11PRG-2926-SM-5987A
50-59 years, male
265.1
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
264.1
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
263.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
259.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
259.3
GTEX-144FL-3026-SM-5O99C
50-59 years, male
258.0
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
256.1
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
255.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
247.1
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
245.1
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
244.6
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
242.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
238.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
236.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
234.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
234.1
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
231.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
225.5
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
225.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
223.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
222.8
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
220.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
220.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
219.5
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
217.2
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
211.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
209.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
208.3
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
204.1
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
202.8
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
199.4
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
199.2
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
195.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
192.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
188.5
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
187.1
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
187.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
185.6
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
185.1
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
182.7
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
180.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
171.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
167.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
165.3
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
156.5
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
153.9
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
153.8
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
150.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
150.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
140.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
113.8
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
104.1
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
100.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 345.1
Samples: 108
Max RPKM: 854.7
Min RPKM: 141.3
Std RPKM: 121.7
Median RPKM: 310.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
854.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
708.4
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
669.3
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
633.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
566.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
528.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
517.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
517.4
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
514.4
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
514.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
496.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
490.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
484.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
482.6
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
481.1
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
480.9
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
479.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
476.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
468.5
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
463.3
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
449.6
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
431.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
430.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
422.1
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
422.0
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
416.8
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
415.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
414.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
410.5
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
407.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
405.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
403.9
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
387.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
386.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
386.6
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
386.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
384.4
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
377.6
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
374.3
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
374.0
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
372.9
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
363.5
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
359.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
358.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
347.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
336.7
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
335.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
334.9
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
331.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
330.9
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
330.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
322.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
320.5
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
311.1
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
309.2
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
306.4
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
304.9
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
298.7
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
296.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
295.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
293.3
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
292.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
290.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
290.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
283.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
281.7
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
281.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
281.0
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
280.2
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
277.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
277.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
277.1
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
276.1
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
274.9
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
274.2
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
274.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
273.3
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
271.0
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
266.1
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
264.7
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
260.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
258.9
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
257.0
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
257.0
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
254.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
247.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
245.6
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
245.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
243.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
241.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
237.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
237.1
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
232.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
230.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
230.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
216.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
215.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
212.5
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
211.6
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
210.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
208.8
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
202.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
201.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
189.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
184.9
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
167.7
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
162.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
141.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.