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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1021.9
Min RPKM: 135.1
Std RPKM: 165.1
Median RPKM: 462.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
1021.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
923.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
921.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
920.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
763.5
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
762.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
753.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
743.2
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
725.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
718.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
677.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
672.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
654.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
649.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
646.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
635.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
634.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
632.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
630.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
629.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
626.4
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
620.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
619.6
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
616.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
613.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
612.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
598.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
593.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
583.2
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
579.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
577.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
566.6
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
559.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
550.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
549.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
549.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
544.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
539.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
535.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
532.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
531.9
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
531.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
530.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
524.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
523.0
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
517.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
517.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
509.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
506.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
504.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
500.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
498.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
497.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
485.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
482.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
471.7
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
469.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
466.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
462.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
459.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
455.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
452.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
445.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
444.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
442.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
433.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
429.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
427.9
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
425.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
422.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
419.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
418.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
415.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
412.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
412.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
408.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
407.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
407.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
404.1
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
403.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
401.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
400.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
395.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
387.6
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
385.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
385.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
384.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
378.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
377.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
371.9
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
368.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
368.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
356.0
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
354.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
353.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
350.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
341.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
335.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
334.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
316.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
313.1
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
312.9
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
310.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
283.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
278.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
275.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
267.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
263.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
261.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
249.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
226.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
203.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
188.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
180.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
172.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
135.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
135.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.