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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1009.0
Min RPKM: 0.3
Std RPKM: 225.0
Median RPKM: 245.4
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
1009.0
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
896.5
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
726.9
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
703.5
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
659.0
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
654.5
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
558.1
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
538.2
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
516.8
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
515.0
GTEX-X261-2426-SM-4PQZU
50-59 years, male
504.4
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
475.9
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
403.8
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
382.3
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
358.5
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
355.0
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
341.7
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
325.8
GTEX-Y111-2626-SM-4TT24
50-59 years, male
321.3
GTEX-13O21-1926-SM-5MR39
50-59 years, male
308.4
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
296.2
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
293.4
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
286.6
GTEX-11P82-0926-SM-5986X
20-29 years, male
278.4
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
269.8
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
267.4
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
251.6
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
249.7
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
245.4
GTEX-1445S-2926-SM-5O993
60-69 years, male
244.4
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
238.8
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
236.5
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
225.4
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
217.9
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
209.8
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
191.4
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
190.6
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
184.4
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
177.9
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
165.2
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
145.0
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
132.9
GTEX-13113-1526-SM-5EGHV
60-69 years, female
112.2
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
101.7
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
82.1
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
72.4
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
65.9
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
61.9
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
60.3
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
54.6
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
46.2
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
39.6
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
15.9
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
12.6
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
12.5
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
0.4
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
0.3
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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