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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 540.0
Min RPKM: 64.6
Std RPKM: 76.7
Median RPKM: 224.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
540.0
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
410.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
395.6
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
394.7
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
377.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
375.8
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
374.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
368.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
350.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
341.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
334.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
327.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
323.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
321.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
317.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
315.5
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
313.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
309.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
304.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
302.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
301.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
300.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
292.5
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
286.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
284.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
280.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
279.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
276.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
276.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
275.7
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
273.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
266.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
263.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
263.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
261.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
260.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
257.5
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
255.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
255.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
253.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
251.6
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
250.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
248.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
248.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
245.5
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
243.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
243.0
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
242.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
238.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
238.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
235.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
234.4
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
234.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
231.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
230.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
230.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
229.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
228.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
224.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
221.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
219.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
215.6
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
212.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
212.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
211.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
210.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
210.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
209.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
207.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
207.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
206.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
206.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
201.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
200.5
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
200.0
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
199.5
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
199.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
198.7
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
198.3
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
197.0
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
193.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
191.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
189.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
187.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
187.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
186.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
185.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
180.0
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
179.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
179.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
178.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
175.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
173.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
173.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
173.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
172.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
167.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
166.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
166.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
163.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
162.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
158.6
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
158.3
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
157.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
153.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
151.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
151.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
149.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
134.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
129.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
118.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
109.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
94.6
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
83.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
73.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
70.5
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
64.6
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.