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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 212.6
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 212.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 223.1
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 177.4
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 199
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 166.2
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 278.4
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 200.6
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 223.6
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 190.6
Min RPKM: 107.4
Std RPKM: 16.5
Median RPKM: 143.5
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
190.6
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
188.9
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
183.8
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
179.2
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
178.1
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
178.0
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
175.9
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
175.7
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
174.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
173.5
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
172.8
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
170.9
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
170.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
169.9
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
169.6
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
169.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
169.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
168.0
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
167.7
GTEX-11DXZ-2126-SM-59881
50-59 years, male
166.5
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
165.0
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
164.7
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
164.4
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
164.3
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
164.2
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
163.8
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
162.8
GTEX-XPT6-1626-SM-4B655
20-29 years, male
162.2
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
161.4
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
161.0
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
160.4
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
160.1
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
159.7
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
158.4
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
157.9
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
157.8
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
157.6
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
157.3
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
157.2
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
157.2
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
157.1
GTEX-13112-0226-SM-5P9IV
50-59 years, male
157.0
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
156.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
155.9
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
155.4
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
155.3
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
155.2
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
155.0
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
154.8
GTEX-117XS-2026-SM-5GID1
60-69 years, male
153.6
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
153.6
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
153.5
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
153.4
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
153.4
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
153.4
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
153.3
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
153.0
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
152.9
GTEX-QLQW-1026-SM-447A9
30-39 years, male
152.6
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
152.3
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
151.6
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
151.4
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
151.3
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
151.2
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
151.0
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
150.3
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
150.2
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
150.1
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
150.0
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
149.7
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
149.5
GTEX-R55C-1426-SM-48FED
40-49 years, male
149.4
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
149.0
GTEX-S33H-0126-SM-4AD62
30-39 years, male
147.0
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
146.2
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
146.1
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
145.1
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
145.0
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
145.0
GTEX-13111-1526-SM-5EGJX
50-59 years, male
144.5
GTEX-REY6-0126-SM-48FDT
60-69 years, male
144.3
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
143.8
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
143.8
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
143.8
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
143.7
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
143.6
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
143.5
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
143.2
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
142.9
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
142.9
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
142.3
GTEX-X261-2326-SM-4PQYU
50-59 years, male
142.2
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
142.1
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
141.7
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
141.6
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
141.4
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
141.3
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
141.1
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
140.9
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
140.9
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
140.4
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
140.3
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
140.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
139.6
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
139.0
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
139.0
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
138.9
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
138.9
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
138.8
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
138.3
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
137.7
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
137.5
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
137.4
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
136.9
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
136.6
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
136.5
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
135.9
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
135.9
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
135.4
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
134.5
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
134.3
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
134.0
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
134.0
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
133.8
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
133.7
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
133.7
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
133.6
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
133.5
GTEX-11OF3-1826-SM-5987N
60-69 years, male
133.4
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
133.2
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
133.1
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
132.9
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
132.9
GTEX-Y111-2426-SM-4TT23
50-59 years, male
132.8
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
132.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
132.1
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
130.3
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
130.3
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
129.8
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
129.6
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
129.5
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
129.4
GTEX-S95S-1126-SM-4B64E
60-69 years, male
129.2
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
128.6
GTEX-R55D-0126-SM-48FEL
50-59 years, male
128.0
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
127.4
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
127.2
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
127.1
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
126.8
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
126.6
GTEX-12696-0226-SM-5EGL3
60-69 years, male
126.5
GTEX-V955-1926-SM-4KL1L
60-69 years, male
126.4
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
126.3
GTEX-RN64-2326-SM-48FDW
50-59 years, male
126.2
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
125.7
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
125.5
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
125.2
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
123.8
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
122.9
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
122.3
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
121.9
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
121.4
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
121.0
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
118.6
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
118.2
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
117.7
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
116.9
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
116.6
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
113.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
113.9
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
110.8
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
107.4
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.