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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 949.1
Min RPKM: 67.2
Std RPKM: 161.7
Median RPKM: 262.8
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
949.1
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
947.0
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
706.2
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
656.9
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
618.3
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
579.0
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
557.5
GTEX-Q734-0726-SM-48TZP
40-49 years, female
527.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
519.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
482.1
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
482.0
GTEX-S341-0726-SM-4AD5R
40-49 years, female
469.5
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
466.4
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
461.9
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
458.2
GTEX-QCQG-1426-SM-48U22
50-59 years, female
452.5
GTEX-P78B-1926-SM-3P616
40-49 years, female
439.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
397.6
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
397.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
386.8
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
383.5
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
382.5
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
382.3
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
380.0
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
365.7
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
363.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
360.3
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
352.3
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
348.8
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
347.6
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
338.9
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
330.3
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
321.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
318.0
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
317.4
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
304.1
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
303.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
295.4
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
293.9
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
293.6
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
287.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
287.4
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
286.6
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
282.6
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
278.1
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
268.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
267.3
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
266.0
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
262.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
261.6
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
260.9
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
252.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
240.3
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
238.3
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
236.4
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
233.8
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
229.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
225.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
221.5
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
220.3
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
218.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
217.4
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
215.5
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
213.4
GTEX-RU72-2226-SM-46MUE
50-59 years, female
212.3
GTEX-11I78-1926-SM-59878
50-59 years, female
211.0
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
203.4
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
203.0
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
195.6
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
194.6
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
194.0
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
189.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
188.3
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
185.7
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
184.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
183.6
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
181.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
170.9
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
170.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
169.4
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
167.8
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
165.1
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
163.2
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
163.0
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
159.7
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
151.4
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
146.7
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
133.1
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
130.5
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
124.3
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
118.5
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
114.1
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
112.2
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
110.4
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
109.7
GTEX-S32W-1226-SM-4AD67
50-59 years, female
104.6
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
67.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.