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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 298
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 10.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 9.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2020.8
Min RPKM: 6.8
Std RPKM: 214.4
Median RPKM: 75.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
2020.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
1758.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
845.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
827.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
728.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
677.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
491.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
395.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
392.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
375.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
364.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
363.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
362.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
358.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
348.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
341.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
338.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
334.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
308.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
307.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
304.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
303.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
302.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
300.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
278.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
278.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
272.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
243.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
239.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
237.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
223.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
206.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
204.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
194.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
191.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
187.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
187.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
181.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
174.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
171.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
168.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
165.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
163.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
161.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
156.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
154.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
148.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
145.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
145.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
143.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
140.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
136.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
134.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
133.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
133.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
130.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
130.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
127.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
125.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
121.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
118.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
115.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
114.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
113.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
111.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
111.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
110.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
110.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
106.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
105.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
105.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
104.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
104.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
102.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
101.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
99.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
98.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
97.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
97.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
97.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
96.0
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
94.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
93.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
93.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
91.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
91.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
91.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
90.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
89.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
89.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
87.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
87.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
86.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
86.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
84.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
83.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
82.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
82.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
81.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
80.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
79.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
79.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
79.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
76.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
76.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
76.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
76.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
75.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
74.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
74.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
73.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
72.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
72.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
71.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
68.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
68.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
66.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
65.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
65.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
65.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
65.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
64.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
64.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
64.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
61.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
61.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
60.8
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
59.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
58.8
GTEX-117XS-1926-SM-5GICO
60-69 years, male
58.4
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
57.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
57.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
57.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
56.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
56.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
55.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
54.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
53.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
53.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
53.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
52.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
51.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
51.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
50.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
50.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
50.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
50.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
49.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
49.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
48.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
48.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
48.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
48.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
47.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
46.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
46.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
46.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
45.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
45.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
44.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
43.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
42.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
41.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
41.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
40.8
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
40.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
39.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
39.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
39.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
38.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
38.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
38.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
38.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
37.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
37.4
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
36.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
36.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
35.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
35.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
34.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
34.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
32.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
32.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
31.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
31.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
30.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
30.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
29.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
28.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
28.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
28.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
27.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
27.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
26.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
25.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
25.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
24.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
24.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
23.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
23.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
22.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
20.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
19.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
18.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
18.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
18.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
17.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
17.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
16.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
11.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
10.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
9.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
8.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
6.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.