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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 61.9
Min RPKM: 9.4
Std RPKM: 14.6
Median RPKM: 22.0
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
61.9
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
60.0
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
58.9
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
57.3
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
56.2
GTEX-13O61-1326-SM-5KM31
60-69 years, male
56.1
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
54.5
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
54.4
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
53.4
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
53.2
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
53.1
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
50.8
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
50.6
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
50.4
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
49.6
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
49.6
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
46.7
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
44.8
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
43.7
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
42.5
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
39.8
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
37.4
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
36.2
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
35.4
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
35.2
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
34.9
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
33.5
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
32.9
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
31.9
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
31.8
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
30.6
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
30.6
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
26.0
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
25.9
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
25.5
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
24.7
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
24.2
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
24.1
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
23.3
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
23.0
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
22.9
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
22.7
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
22.5
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
22.3
GTEX-ZTSS-0926-SM-59865
40-49 years, male
21.7
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
21.3
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
20.7
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
20.6
GTEX-13113-1226-SM-5EGHT
60-69 years, female
20.5
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
20.5
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
20.4
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
19.8
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
19.4
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
19.1
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
19.1
GTEX-13111-1426-SM-5DUW3
50-59 years, male
18.9
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
18.5
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
18.4
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
18.4
GTEX-1122O-1326-SM-5H11F
60-69 years, female
18.2
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
18.2
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
18.1
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
17.6
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
17.5
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
17.5
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
17.4
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
16.9
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
16.7
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
16.6
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
16.5
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
16.5
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
16.4
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
16.2
GTEX-1192X-2526-SM-59868
50-59 years, male
15.7
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
15.5
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
15.4
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
15.3
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
15.3
GTEX-111YS-1426-SM-5GID8
60-69 years, male
15.1
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
14.4
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
14.3
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
13.7
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
13.5
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
13.1
GTEX-117YX-0326-SM-5GICL
50-59 years, male
12.7
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
10.8
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
10.5
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
9.4
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
