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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 573.2
Min RPKM: 180.5
Std RPKM: 74.1
Median RPKM: 344.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
573.2
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
536.8
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
528.4
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
521.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
505.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
502.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
495.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
488.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
485.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
466.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
452.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
441.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
439.2
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
436.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
434.6
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
433.9
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
428.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
427.0
GTEX-PX3G-0926-SM-48U12
20-29 years, female
424.4
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
421.5
GTEX-QV31-0126-SM-447BP
30-39 years, male
418.0
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
409.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
400.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
398.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
392.5
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
390.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
388.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
383.3
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
382.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
380.7
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
380.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
377.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
376.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
374.7
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
373.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
373.6
GTEX-144GN-2126-SM-5O99D
50-59 years, male
373.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
372.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
372.7
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
369.3
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
369.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
368.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
364.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
359.6
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
358.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
354.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
353.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
353.8
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
353.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
348.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
347.5
GTEX-QCQG-0226-SM-48U28
50-59 years, female
345.1
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
343.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
342.4
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
338.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
337.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
336.9
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
334.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
334.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
333.8
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
333.3
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
333.0
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
331.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
331.5
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
329.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
325.9
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
325.7
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
324.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
323.2
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
321.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
318.9
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
314.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
312.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
307.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
306.3
GTEX-R55G-0226-SM-48FEI
40-49 years, female
306.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
305.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
305.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
301.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
299.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
299.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
297.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
296.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
295.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
293.2
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
291.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
290.4
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
288.0
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
286.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
284.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
277.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
270.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
269.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
265.3
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
265.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
261.5
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
260.4
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
252.5
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
251.5
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
249.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
244.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
242.7
GTEX-X585-1826-SM-4QAS3
50-59 years, male
200.3
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
180.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.