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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 187.9
Min RPKM: 1.6
Std RPKM: 44.8
Median RPKM: 62.4
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
187.9
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
165.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
137.3
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
132.8
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
131.5
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
130.6
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
124.4
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
122.2
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
122.2
GTEX-11I78-2026-SM-5987C
50-59 years, female
120.4
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
120.4
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
119.5
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
117.9
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
117.4
GTEX-S341-1226-SM-4AD5S
40-49 years, female
116.9
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
115.7
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
109.1
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
106.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
106.3
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
98.2
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
96.0
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
93.8
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
93.8
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
91.2
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
90.5
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
90.2
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
89.3
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
88.1
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
87.9
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
87.1
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
85.3
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
81.6
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
81.6
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
78.2
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
75.1
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
74.4
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
72.6
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
72.6
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
72.6
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
70.4
GTEX-QCQG-1226-SM-48U23
50-59 years, female
69.0
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
68.1
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
67.3
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
67.2
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
66.5
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
64.5
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
63.8
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
62.6
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
62.2
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
61.4
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
60.5
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
58.3
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
55.5
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
52.3
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
51.0
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
50.7
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
47.1
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
44.2
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
41.5
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
41.5
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
40.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
38.4
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
37.7
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
37.1
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
34.0
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
33.7
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
31.7
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
31.4
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
28.5
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
24.9
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
22.4
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
19.0
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
12.6
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
11.1
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
9.4
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
5.6
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
4.8
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
4.6
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
4.1
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
4.0
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
3.5
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
3.2
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
3.2
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
3.1
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
2.6
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
2.5
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
2.3
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
2.2
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
2.1
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
2.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
2.0
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
1.9
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
1.8
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
1.7
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
1.6
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
1.6
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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