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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 785.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 895
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1252.4
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 758.8
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 891.3
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 896.2
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 348.1
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 857.2
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 568.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 512.2
Min RPKM: 226.4
Std RPKM: 38.6
Median RPKM: 309.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
512.2
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
475.5
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
401.7
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
397.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
389.9
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
381.1
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
378.2
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
377.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
377.5
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
374.5
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
374.3
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
366.7
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
366.5
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
359.9
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
359.5
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
356.5
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
356.4
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
356.2
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
352.5
GTEX-V955-1926-SM-4KL1L
60-69 years, male
352.4
GTEX-X261-2326-SM-4PQYU
50-59 years, male
351.0
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
350.7
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
350.0
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
349.8
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
348.6
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
347.0
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
346.6
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
345.9
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
345.8
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
344.1
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
343.6
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
342.2
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
341.8
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
340.3
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
340.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
339.3
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
338.1
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
337.5
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
337.0
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
336.8
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
336.2
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
336.0
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
335.4
GTEX-117XS-2026-SM-5GID1
60-69 years, male
334.8
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
332.7
GTEX-QLQW-1026-SM-447A9
30-39 years, male
331.0
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
330.4
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
329.9
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
329.2
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
328.6
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
327.9
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
327.4
GTEX-13112-0226-SM-5P9IV
50-59 years, male
327.2
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
326.1
GTEX-11OF3-1826-SM-5987N
60-69 years, male
325.5
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
325.3
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
325.0
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
324.9
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
324.6
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
323.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
322.1
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
321.9
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
321.6
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
321.4
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
319.5
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
319.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
318.9
GTEX-XPT6-1626-SM-4B655
20-29 years, male
318.6
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
318.2
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
317.9
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
317.8
GTEX-S95S-1126-SM-4B64E
60-69 years, male
316.4
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
316.2
GTEX-RN64-2326-SM-48FDW
50-59 years, male
315.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
313.6
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
313.1
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
312.8
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
312.7
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
311.9
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
311.6
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
311.3
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
310.4
GTEX-R55D-0126-SM-48FEL
50-59 years, male
310.2
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
310.2
GTEX-REY6-0126-SM-48FDT
60-69 years, male
310.0
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
309.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
309.4
GTEX-11DXZ-2126-SM-59881
50-59 years, male
309.2
GTEX-R55C-1426-SM-48FED
40-49 years, male
308.2
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
308.0
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
307.9
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
307.8
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
307.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
306.9
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
306.9
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
306.5
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
306.4
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
306.3
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
305.9
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
305.8
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
305.3
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
305.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
304.9
GTEX-13111-1526-SM-5EGJX
50-59 years, male
304.5
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
303.9
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
302.5
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
302.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
301.9
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
300.9
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
300.8
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
300.1
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
300.0
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
299.4
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
299.3
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
298.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
298.1
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
297.8
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
296.6
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
296.2
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
295.3
GTEX-S33H-0126-SM-4AD62
30-39 years, male
295.3
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
294.5
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
294.5
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
294.0
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
292.2
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
292.1
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
291.4
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
291.0
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
290.7
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
290.6
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
289.5
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
289.0
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
287.7
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
287.6
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
286.6
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
286.0
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
285.9
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
285.9
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
284.2
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
283.4
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
282.3
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
282.3
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
281.9
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
281.6
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
281.0
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
279.7
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
279.0
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
277.5
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
276.6
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
274.2
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
273.3
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
270.6
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
270.5
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
268.5
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
266.8
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
265.0
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
264.7
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
262.4
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
262.2
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
260.0
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
259.1
GTEX-Y111-2426-SM-4TT23
50-59 years, male
259.0
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
257.9
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
257.7
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
254.9
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
251.9
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
248.8
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
245.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
244.8
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
234.1
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
229.8
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
226.4
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.