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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1157.2
Min RPKM: 492.5
Std RPKM: 139.3
Median RPKM: 794.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
1157.2
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
1145.3
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
1138.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
1132.2
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
1108.7
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
1077.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
1033.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
1001.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
991.0
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
989.9
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
981.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
975.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
974.8
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
974.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
971.0
GTEX-R55G-0226-SM-48FEI
40-49 years, female
962.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
962.0
GTEX-144GN-2126-SM-5O99D
50-59 years, male
953.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
935.3
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
927.6
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
923.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
922.6
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
918.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
911.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
908.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
903.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
899.9
GTEX-QCQG-0226-SM-48U28
50-59 years, female
898.8
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
897.6
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
893.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
891.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
890.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
882.8
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
880.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
877.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
870.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
865.2
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
845.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
835.1
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
831.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
828.2
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
827.2
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
825.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
825.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
823.0
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
818.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
813.0
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
805.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
803.7
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
800.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
798.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
794.8
GTEX-QLQW-0126-SM-447BK
30-39 years, male
793.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
792.1
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
789.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
788.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
788.4
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
786.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
786.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
784.5
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
782.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
776.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
771.3
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
766.3
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
763.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
754.5
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
752.3
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
750.6
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
744.9
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
741.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
740.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
737.5
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
735.3
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
719.1
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
718.6
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
718.4
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
717.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
716.8
GTEX-13111-0126-SM-5EGHO
50-59 years, male
715.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
714.6
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
712.9
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
711.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
708.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
705.2
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
703.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
701.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
691.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
690.6
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
679.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
678.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
663.3
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
656.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
645.1
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
641.3
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
634.2
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
628.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
616.5
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
613.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
595.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
571.2
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
559.6
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
552.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
511.5
GTEX-Q734-0226-SM-48U1A
40-49 years, female
492.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.