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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2246.8
Min RPKM: 896.9
Std RPKM: 313.5
Median RPKM: 1302.4
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
2246.8
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
2206.3
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
2115.4
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
2041.1
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1995.3
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1966.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1958.9
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1927.4
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1917.3
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1911.0
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1907.8
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1899.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1848.8
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1827.5
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1800.6
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1797.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1764.2
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1674.7
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1637.2
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1622.3
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1606.8
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1586.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1571.5
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1540.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1539.4
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1535.4
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1533.3
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1530.5
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1527.8
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1449.0
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
1434.3
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1415.2
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1410.4
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1396.2
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1393.8
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
1381.1
GTEX-11I78-1926-SM-59878
50-59 years, female
1378.5
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
1375.4
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
1369.4
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1365.9
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
1365.4
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1363.5
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1360.1
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1348.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1335.9
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1334.9
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
1323.1
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
1306.1
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
1302.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1296.0
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1295.1
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
1293.2
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
1282.4
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
1281.7
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
1279.6
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
1265.7
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1262.9
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
1260.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
1250.8
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1249.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
1239.4
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1236.2
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
1232.5
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1227.8
GTEX-P78B-1926-SM-3P616
40-49 years, female
1214.9
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
1213.7
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
1204.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
1204.0
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1195.7
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
1194.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
1183.7
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1179.2
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1168.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
1166.6
GTEX-QCQG-1426-SM-48U22
50-59 years, female
1166.6
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
1158.0
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
1155.5
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1144.3
GTEX-S341-0726-SM-4AD5R
40-49 years, female
1141.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
1105.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
1082.8
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
1078.0
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
1078.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
1075.4
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
1066.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
1062.3
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1060.4
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
1045.6
GTEX-Q734-0726-SM-48TZP
40-49 years, female
1043.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
1022.5
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
1016.9
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
1010.5
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
962.6
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
941.8
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
920.4
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
911.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
896.9
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.