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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 635.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 345.4
Min RPKM: 119.1
Std RPKM: 43.4
Median RPKM: 201.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
345.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
336.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
322.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
317.8
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
313.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
309.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
294.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
290.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
287.2
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
285.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
278.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
277.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
275.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
273.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
273.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
263.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
261.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
256.9
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
255.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
250.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
247.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
236.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
234.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
233.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
232.9
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
231.3
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
230.0
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
229.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
228.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
228.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
227.9
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
225.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
224.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
223.5
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
221.9
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
217.6
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
217.3
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
213.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
213.0
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
211.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
209.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
209.3
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
209.1
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
208.3
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
207.3
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
207.3
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
206.7
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
206.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
206.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
205.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
205.2
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
204.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
204.1
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
203.7
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
203.4
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
203.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
202.4
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
201.1
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
200.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
199.6
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
199.6
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
199.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
199.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
198.4
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
198.2
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
197.5
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
197.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
196.4
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
195.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
194.8
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
193.3
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
193.0
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
192.8
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
192.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
191.3
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
190.7
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
190.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
188.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
188.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
187.0
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
185.7
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
185.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
184.9
GTEX-11PRG-2926-SM-5987A
50-59 years, male
184.3
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
184.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
183.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
183.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
182.7
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
182.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
180.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
180.1
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
179.5
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
179.2
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
177.4
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
176.5
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
175.7
GTEX-1128S-2726-SM-5H12C
60-69 years, female
175.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
174.3
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
174.1
GTEX-145MF-2726-SM-5O995
50-59 years, male
173.3
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
172.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
170.7
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
169.4
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
168.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
167.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
158.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
156.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
155.9
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
148.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
148.3
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
143.9
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
143.8
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
133.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
119.1
Show all
Brain - Frontal Cortex (BA9) RPKM: 222.0
Samples: 108
Max RPKM: 590.6
Min RPKM: 127.5
Std RPKM: 66.1
Median RPKM: 207.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
590.6
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
502.0
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
423.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
370.9
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
340.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
327.3
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
308.0
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
297.6
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
294.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
293.9
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
289.3
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
280.6
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
276.5
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
275.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
265.4
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
263.3
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
259.1
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
257.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
256.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
253.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
252.7
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
252.4
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
251.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
251.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
249.9
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
248.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
243.5
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
242.2
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
240.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
239.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
239.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
237.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
236.4
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
235.8
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
231.2
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
231.1
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
230.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
229.6
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
228.8
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
228.6
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
225.1
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
222.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
220.0
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
219.1
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
218.4
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
217.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
216.7
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
216.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
214.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
213.4
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
213.1
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
212.1
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
211.7
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
207.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
207.0
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
205.5
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
205.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
202.7
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
201.8
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
201.7
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
200.1
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
198.1
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
198.0
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
196.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
196.3
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
195.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
195.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
195.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
194.3
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
194.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
194.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
193.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
190.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
188.8
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
188.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
188.4
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
188.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
187.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
187.6
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
187.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
186.1
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
185.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
184.1
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
183.8
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
182.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
181.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
180.7
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
178.2
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
177.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
177.4
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
177.1
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
177.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
171.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
171.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
170.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
164.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
162.4
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
162.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
160.7
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
157.1
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
155.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
153.6
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
152.7
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
143.8
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
143.1
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
137.5
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
131.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
127.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.