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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 590.7
Min RPKM: 112.0
Std RPKM: 69.6
Median RPKM: 251.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
590.7
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
487.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
426.3
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
394.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
391.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
387.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
363.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
362.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
356.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
354.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
341.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
337.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
336.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
336.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
335.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
325.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
325.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
322.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
321.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
320.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
315.2
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
314.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
310.1
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
308.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
301.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
300.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
292.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
291.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
288.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
287.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
286.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
283.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
283.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
281.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
280.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
279.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
278.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
275.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
275.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
274.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
274.0
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
272.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
272.3
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
270.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
268.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
266.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
265.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
265.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
261.8
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
260.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
260.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
260.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
258.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
258.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
256.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
254.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
253.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
252.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
251.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
251.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
250.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
249.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
247.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
246.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
246.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
245.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
245.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
244.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
242.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
242.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
241.0
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
240.2
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
239.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
239.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
238.9
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
238.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
237.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
236.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
235.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
233.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
232.5
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
230.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
228.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
226.7
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
226.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
226.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
221.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
220.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
219.0
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
217.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
213.0
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
212.4
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
211.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
209.4
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
208.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
206.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
203.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
197.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
195.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
191.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
189.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
187.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
186.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
184.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
183.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
179.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
170.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
167.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
166.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
165.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
163.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
159.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
157.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
155.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
142.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
116.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
112.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.