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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2593.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 2223.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2236.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2356.8
Min RPKM: 448.7
Std RPKM: 236.1
Median RPKM: 796.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
2356.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1689.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1598.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1592.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1554.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
1351.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1312.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1300.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1280.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
1232.0
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1219.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
1198.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
1191.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1183.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
1179.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
1173.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
1173.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
1162.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1126.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
1113.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1111.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
1105.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
1103.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
1089.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
1086.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
1079.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
1078.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
1077.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
1075.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
1067.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
1058.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
1047.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
1035.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
1035.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
1026.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
987.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
984.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
982.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
972.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
957.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
944.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
943.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
941.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
941.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
939.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
938.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
938.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
937.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
937.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
937.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
930.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
918.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
917.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
914.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
911.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
908.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
903.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
903.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
902.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
902.8
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
902.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
901.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
900.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
898.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
894.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
894.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
890.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
885.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
884.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
879.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
879.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
873.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
873.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
872.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
870.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
863.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
853.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
853.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
852.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
851.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
850.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
849.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
845.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
842.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
837.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
836.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
833.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
833.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
829.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
826.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
825.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
824.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
824.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
821.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
819.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
818.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
816.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
815.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
815.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
814.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
814.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
814.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
812.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
809.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
807.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
806.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
803.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
790.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
787.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
786.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
785.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
783.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
782.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
781.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
779.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
776.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
775.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
774.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
772.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
772.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
772.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
771.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
770.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
770.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
761.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
756.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
753.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
752.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
750.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
747.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
744.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
743.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
741.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
741.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
740.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
738.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
736.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
734.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
734.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
733.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
732.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
721.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
721.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
719.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
712.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
711.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
705.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
704.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
702.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
700.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
700.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
700.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
699.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
698.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
696.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
693.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
693.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
689.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
685.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
685.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
684.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
683.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
678.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
676.8
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
669.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
667.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
663.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
658.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
655.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
653.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
651.0
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
647.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
642.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
642.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
641.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
641.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
637.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
636.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
630.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
628.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
621.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
616.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
612.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
612.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
609.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
607.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
606.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
605.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
603.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
598.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
597.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
592.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
582.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
581.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
578.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
576.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
571.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
557.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
557.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
553.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
546.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
543.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
542.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
541.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
529.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
521.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
521.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
512.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
507.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
502.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
499.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
498.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
487.9
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
448.7
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.