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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 875.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 714.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 1137.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 833.8
Min RPKM: 20.6
Std RPKM: 174.1
Median RPKM: 246.7
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
833.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
830.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
749.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
698.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
668.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
661.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
652.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
638.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
633.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
621.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
603.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
592.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
589.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
575.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
561.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
550.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
549.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
546.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
542.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
529.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
529.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
528.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
528.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
523.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
522.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
517.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
517.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
514.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
503.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
486.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
486.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
478.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
475.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
467.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
466.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
461.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
454.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
454.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
449.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
438.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
436.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
423.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
421.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
421.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
407.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
399.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
397.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
397.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
397.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
393.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
388.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
388.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
386.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
385.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
382.7
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
378.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
377.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
373.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
372.0
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
371.6
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
367.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
366.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
363.6
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
356.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
354.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
346.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
344.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
344.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
341.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
336.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
334.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
332.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
330.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
326.9
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
317.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
315.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
313.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
312.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
310.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
309.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
308.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
304.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
299.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
297.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
296.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
295.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
295.6
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
293.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
290.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
284.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
281.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
275.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
273.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
273.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
272.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
271.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
267.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
267.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
264.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
261.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
260.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
260.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
255.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
252.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
250.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
248.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
247.8
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
245.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
244.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
243.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
232.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
230.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
229.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
229.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
228.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
227.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
223.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
220.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
218.8
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
218.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
217.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
212.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
211.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
210.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
206.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
204.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
204.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
201.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
200.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
199.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
195.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
194.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
193.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
191.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
190.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
186.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
184.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
181.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
180.3
GTEX-R53T-1526-SM-48FEK
50-59 years, female
177.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
173.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
172.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
169.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
169.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
169.3
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
166.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
165.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
164.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
164.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
161.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
155.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
155.0
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
153.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
150.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
144.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
144.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
142.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
137.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
130.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
130.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
129.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
127.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
127.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
125.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
125.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
121.9
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
118.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
117.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
116.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
115.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
114.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
112.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
112.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
109.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
104.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
103.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
102.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
101.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
101.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
98.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
97.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
95.8
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
95.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
89.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
89.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
87.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
86.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
86.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
83.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
78.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
77.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
74.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
73.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
72.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
71.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
70.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
67.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
62.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
62.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
62.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
62.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
58.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
57.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
57.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
53.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
46.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
46.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
45.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
42.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
40.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
39.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
29.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
27.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
20.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.