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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 187.8
Min RPKM: 7.9
Std RPKM: 25.4
Median RPKM: 42.0
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
187.8
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
151.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
105.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
101.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
91.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
83.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
83.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
82.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
81.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
78.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
76.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
74.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
73.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
73.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
72.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
70.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
69.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
68.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
64.5
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
64.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
62.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
57.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
57.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
57.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
56.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
56.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
55.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
55.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
55.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
54.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
54.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
54.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
53.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
53.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
52.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
52.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
52.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
51.7
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
51.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
51.4
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
51.0
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
50.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
50.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
49.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
48.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
48.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
46.4
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
46.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
45.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
44.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
44.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
44.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
43.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
43.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
43.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
43.1
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
42.2
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
42.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
42.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
41.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
40.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
40.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
40.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
39.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
39.6
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
39.6
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
38.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
38.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
38.7
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
38.6
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
38.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
38.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
37.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
37.4
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
37.1
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
36.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
35.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
35.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
35.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
34.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
34.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
34.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
33.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
33.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
32.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
32.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
31.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
31.1
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
30.2
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
29.4
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
28.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
28.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
28.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
27.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
26.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
26.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
25.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
25.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
24.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
24.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
23.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
23.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
22.4
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
21.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
20.8
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
20.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
19.6
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
19.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
17.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
17.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
17.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
16.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
14.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
13.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
12.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
8.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
7.9
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.