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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 3433.1
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 4109.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 4662.5
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 2037.6
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 2826.6
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 2779.9
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 289.9
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 1574.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 515.6
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 4370.8
Min RPKM: 490.6
Std RPKM: 463.0
Median RPKM: 1194.4
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
4370.8
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
2534.6
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
2497.0
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
2425.3
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
2330.6
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
2278.3
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
2050.2
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
2050.0
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
1981.7
GTEX-V955-1926-SM-4KL1L
60-69 years, male
1887.9
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
1880.5
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
1876.0
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
1851.0
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
1844.9
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
1828.1
GTEX-X261-2326-SM-4PQYU
50-59 years, male
1824.2
GTEX-R55D-0126-SM-48FEL
50-59 years, male
1795.3
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
1763.4
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
1688.0
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
1655.4
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
1649.9
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
1598.9
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
1593.0
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
1573.1
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
1558.2
GTEX-RN64-2326-SM-48FDW
50-59 years, male
1541.2
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
1532.6
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
1530.3
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
1527.6
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
1510.3
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
1508.3
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
1504.7
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
1504.0
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
1496.3
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
1490.6
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
1479.0
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
1468.3
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
1467.6
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
1467.1
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
1463.8
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
1460.7
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
1449.1
GTEX-S33H-0126-SM-4AD62
30-39 years, male
1436.2
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
1419.8
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
1418.6
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
1399.0
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
1395.3
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
1395.1
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
1374.1
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
1373.2
GTEX-QLQW-1026-SM-447A9
30-39 years, male
1366.2
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
1360.3
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
1358.4
GTEX-117XS-2026-SM-5GID1
60-69 years, male
1357.0
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
1353.1
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
1349.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
1347.7
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
1335.1
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
1331.3
GTEX-13111-1526-SM-5EGJX
50-59 years, male
1322.4
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
1310.3
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
1306.4
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
1304.0
GTEX-R55C-1426-SM-48FED
40-49 years, male
1298.8
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
1290.7
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
1289.4
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
1282.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
1267.6
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
1266.2
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
1263.8
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
1263.7
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
1255.2
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
1246.0
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
1240.2
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
1235.7
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
1235.7
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
1235.3
GTEX-11DXZ-2126-SM-59881
50-59 years, male
1233.5
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
1230.3
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
1228.9
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
1227.4
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
1211.4
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
1208.9
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
1206.2
GTEX-S95S-1126-SM-4B64E
60-69 years, male
1202.1
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
1201.5
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
1187.3
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
1179.6
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
1156.9
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
1155.9
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
1154.4
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
1150.5
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
1148.6
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
1137.4
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
1137.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
1136.5
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
1127.8
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
1110.8
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
1104.8
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
1092.7
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
1088.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
1078.7
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
1070.4
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
1055.7
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
1054.8
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
1052.4
GTEX-11OF3-1826-SM-5987N
60-69 years, male
1052.2
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
1049.2
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
1041.6
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
1039.9
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
1033.7
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
1032.5
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
1025.5
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
1019.3
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
1011.0
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
1003.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
987.7
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
982.2
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
980.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
980.0
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
961.2
GTEX-XPT6-1626-SM-4B655
20-29 years, male
955.5
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
955.2
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
944.4
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
936.7
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
931.0
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
915.7
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
911.8
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
903.9
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
901.4
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
899.2
GTEX-13112-0226-SM-5P9IV
50-59 years, male
894.3
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
892.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
891.0
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
884.8
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
883.6
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
883.2
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
875.2
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
873.3
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
863.1
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
851.4
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
840.4
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
837.9
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
837.7
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
820.5
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
817.4
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
806.4
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
795.6
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
782.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
727.3
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
723.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
712.5
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
709.7
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
708.6
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
704.5
GTEX-REY6-0126-SM-48FDT
60-69 years, male
703.4
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
700.7
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
690.7
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
690.2
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
687.0
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
682.3
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
674.5
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
666.7
GTEX-Y111-2426-SM-4TT23
50-59 years, male
664.9
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
654.9
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
630.4
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
625.5
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
625.1
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
617.9
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
591.3
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
538.1
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
490.6
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.