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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 281.7
Min RPKM: 28.6
Std RPKM: 41.0
Median RPKM: 103.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
281.7
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
218.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
191.1
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
191.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
187.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
184.1
GTEX-X585-1826-SM-4QAS3
50-59 years, male
182.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
182.0
GTEX-R55G-0226-SM-48FEI
40-49 years, female
175.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
167.3
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
163.1
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
157.4
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
156.3
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
154.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
152.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
145.2
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
143.9
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
142.8
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
139.2
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
137.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
136.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
135.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
133.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
130.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
130.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
128.5
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
127.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
125.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
125.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
124.8
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
122.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
122.4
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
119.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
119.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
118.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
117.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
116.5
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
115.7
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
115.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
115.4
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
115.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
113.5
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
112.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
112.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
111.7
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
109.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
109.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
106.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
105.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
105.8
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
104.9
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
104.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
103.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
102.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
100.5
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
100.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
100.1
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
99.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
98.4
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
97.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
97.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
97.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
96.8
GTEX-13111-0126-SM-5EGHO
50-59 years, male
96.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
94.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
94.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
94.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
92.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
90.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
89.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
88.4
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
87.8
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
87.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
87.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
84.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
83.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
83.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
82.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
81.3
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
77.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
77.7
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
76.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
75.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
74.4
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
71.1
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
70.9
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
70.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
70.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
70.5
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
68.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
67.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
66.6
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
64.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
62.5
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
59.2
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
56.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
54.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
53.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
53.8
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
48.3
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
47.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
42.4
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
42.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
28.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.