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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1338.3
Min RPKM: 92.0
Std RPKM: 201.4
Median RPKM: 415.7
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
1338.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
1057.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
930.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
830.9
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
799.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
751.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
705.5
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
704.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
665.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
662.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
654.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
641.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
612.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
611.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
603.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
594.3
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
588.7
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
586.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
585.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
566.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
565.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
558.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
550.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
527.0
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
523.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
520.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
519.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
513.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
512.8
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
506.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
501.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
492.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
487.4
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
486.5
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
484.7
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
471.9
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
450.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
444.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
443.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
431.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
430.5
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
427.9
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
427.0
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
425.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
424.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
420.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
416.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
415.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
413.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
396.9
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
388.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
388.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
388.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
385.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
378.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
376.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
373.4
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
373.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
366.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
343.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
338.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
337.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
333.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
333.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
323.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
322.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
319.6
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
316.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
309.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
303.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
301.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
294.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
292.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
291.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
288.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
262.5
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
262.1
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
254.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
253.2
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
240.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
238.4
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
233.7
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
219.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
215.7
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
208.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
207.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
205.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
203.7
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
199.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
172.9
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
152.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
136.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
117.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
92.0
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.