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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 480.2
Min RPKM: 15.8
Std RPKM: 100.8
Median RPKM: 172.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
480.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
453.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
375.9
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
358.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
357.3
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
353.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
334.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
319.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
316.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
314.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
314.5
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
313.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
313.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
301.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
286.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
269.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
267.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
267.0
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
262.3
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
260.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
260.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
260.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
258.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
257.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
252.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
252.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
239.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
239.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
234.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
233.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
217.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
217.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
215.9
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
205.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
204.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
202.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
202.3
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
202.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
196.1
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
191.3
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
190.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
187.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
185.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
183.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
183.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
181.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
176.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
168.4
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
166.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
166.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
163.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
163.3
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
163.2
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
155.4
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
148.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
147.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
146.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
140.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
136.4
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
132.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
131.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
131.3
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
127.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
122.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
119.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
115.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
105.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
105.3
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
105.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
101.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
100.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
100.1
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
96.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
90.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
88.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
87.5
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
74.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
72.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
72.7
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
70.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
70.0
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
69.5
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
66.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
57.7
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
54.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
51.4
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
44.0
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
41.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
38.6
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
32.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
28.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
28.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
17.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
15.8
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.