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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 307.6
Min RPKM: 52.4
Std RPKM: 46.3
Median RPKM: 130.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
307.6
GTEX-X585-1826-SM-4QAS3
50-59 years, male
276.8
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
245.2
GTEX-R55G-0226-SM-48FEI
40-49 years, female
244.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
219.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
207.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
206.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
205.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
200.7
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
198.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
194.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
194.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
193.8
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
192.7
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
190.8
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
188.8
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
184.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
184.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
182.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
179.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
179.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
179.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
174.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
171.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
168.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
167.1
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
164.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
162.7
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
162.4
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
162.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
161.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
161.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
153.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
153.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
152.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
152.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
149.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
149.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
149.5
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
148.3
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
147.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
147.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
147.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
145.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
143.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
142.1
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
138.0
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
137.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
134.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
133.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
130.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
130.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
130.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
129.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
126.7
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
124.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
124.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
121.4
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
120.7
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
120.5
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
119.9
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
119.6
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
118.8
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
118.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
118.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
116.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
116.6
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
115.6
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
114.1
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
113.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
113.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
113.2
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
111.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
110.7
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
109.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
109.3
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
108.3
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
105.4
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
102.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
102.2
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
101.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
101.5
GTEX-QCQG-0226-SM-48U28
50-59 years, female
97.7
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
97.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
93.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
92.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
92.8
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
92.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
91.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
91.2
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
89.2
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
88.8
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
86.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
86.9
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
86.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
83.0
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
78.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
78.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
77.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
76.7
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
70.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
69.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
64.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
52.4
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.