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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 32.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 10.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 11
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 314.8
Min RPKM: 17.0
Std RPKM: 52.6
Median RPKM: 88.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
314.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
274.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
255.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
242.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
227.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
218.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
210.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
208.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
205.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
192.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
192.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
188.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
188.5
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
187.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
184.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
177.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
173.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
173.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
171.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
170.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
168.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
167.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
166.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
165.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
165.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
163.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
161.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
160.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
159.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
157.6
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
154.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
154.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
153.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
152.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
150.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
149.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
148.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
144.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
143.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
142.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
140.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
139.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
135.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
134.8
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
134.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
134.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
133.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
132.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
131.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
129.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
127.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
127.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
126.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
126.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
126.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
125.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
125.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
124.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
123.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
121.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
120.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
119.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
119.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
119.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
118.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
117.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
116.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
116.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
114.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
114.1
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
113.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
113.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
112.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
112.5
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
112.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
112.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
111.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
111.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
111.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
110.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
110.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
110.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
110.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
110.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
109.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
108.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
107.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
107.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
107.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
107.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
106.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
103.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
102.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
101.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
100.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
99.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
96.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
95.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
93.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
92.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
92.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
91.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
91.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
91.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
90.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
90.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
89.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
87.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
86.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
86.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
86.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
85.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
84.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
81.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
80.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
79.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
79.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
79.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
77.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
77.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
76.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
75.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
75.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
75.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
74.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
73.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
72.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
72.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
72.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
72.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
72.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
70.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
69.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
68.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
68.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
68.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
67.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
67.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
66.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
66.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
66.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
66.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
66.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
66.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
65.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
65.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
64.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
64.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
62.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
61.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
61.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
61.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
60.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
60.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
60.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
60.2
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
59.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
59.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
57.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
57.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
56.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
56.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
56.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
56.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
55.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
55.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
53.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
52.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
51.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
50.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
49.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
49.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
48.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
48.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
47.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
47.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
47.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
46.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
45.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
44.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
44.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
44.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
43.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
43.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
43.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
43.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
42.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
42.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
40.3
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
40.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
39.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
39.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
38.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
38.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
37.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
36.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
36.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
35.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
34.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
34.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
33.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
33.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
32.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
32.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
30.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
30.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
30.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
28.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
28.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
25.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
24.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
21.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
20.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
17.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.