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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 524.6
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 326.2
Min RPKM: 48.6
Std RPKM: 66.9
Median RPKM: 197.3
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
326.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
322.5
GTEX-X585-3026-SM-46MWF
50-59 years, male
302.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
293.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
293.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
291.0
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
281.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
280.9
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
278.9
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
278.3
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
276.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
271.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
270.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
268.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
266.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
264.5
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
257.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
255.2
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
253.9
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
253.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
252.7
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
250.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
249.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
248.3
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
248.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
247.5
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
246.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
244.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
243.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
242.6
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
241.3
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
241.1
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
239.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
238.8
GTEX-11PRG-2926-SM-5987A
50-59 years, male
236.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
236.3
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
235.5
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
232.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
232.5
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
231.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
228.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
226.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
226.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
219.1
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
217.4
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
215.3
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
214.4
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
213.8
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
210.6
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
209.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
209.2
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
209.0
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
205.3
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
204.8
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
203.9
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
200.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
197.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
197.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
195.7
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
195.1
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
192.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
191.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
189.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
185.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
184.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
184.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
183.8
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
181.2
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
180.6
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
176.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
176.4
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
175.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
174.7
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
174.1
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
172.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
171.9
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
169.4
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
165.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
157.9
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
152.3
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
151.5
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
151.0
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
150.4
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
150.1
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
147.0
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
139.7
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
138.5
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
131.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
126.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
125.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
120.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
118.2
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
117.8
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
117.1
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
111.8
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
108.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
106.2
GTEX-144FL-3026-SM-5O99C
50-59 years, male
105.7
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
101.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
100.0
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
98.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
93.3
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
91.8
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
90.5
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
87.0
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
83.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
79.6
GTEX-11GSP-3226-SM-5986O
60-69 years, female
73.4
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
70.2
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
69.2
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
67.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
64.2
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
51.4
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
48.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 176.0
Samples: 108
Max RPKM: 330.7
Min RPKM: 28.1
Std RPKM: 78.0
Median RPKM: 192.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
330.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
316.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
316.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
311.4
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
306.4
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
303.0
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
298.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
290.7
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
275.7
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
271.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
271.1
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
265.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
264.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
261.7
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
261.6
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
256.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
254.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
251.6
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
251.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
246.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
244.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
241.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
239.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
239.7
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
239.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
237.5
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
234.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
232.9
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
232.3
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
230.7
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
229.2
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
228.1
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
227.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
224.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
224.0
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
222.0
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
220.6
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
220.5
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
218.7
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
218.1
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
214.1
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
211.8
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
206.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
204.9
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
204.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
204.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
202.3
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
201.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
201.0
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
200.3
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
198.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
196.0
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
195.5
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
192.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
192.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
187.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
187.3
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
182.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
180.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
175.8
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
167.6
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
163.4
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
163.2
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
157.3
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
157.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
156.6
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
154.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
148.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
147.7
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
145.6
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
145.3
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
144.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
138.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
136.0
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
135.5
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
135.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
134.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
130.6
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
125.2
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
122.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
120.9
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
117.0
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
114.7
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
104.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
93.0
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
92.9
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
87.5
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
86.1
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
84.3
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
82.6
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
77.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
66.9
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
66.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
62.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
62.7
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
58.0
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
57.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
57.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
56.7
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
56.6
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
52.3
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
52.1
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
50.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
45.5
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
43.5
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
42.2
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
33.8
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
28.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.