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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 156.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 143.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 130.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 151.2
Min RPKM: 79.8
Std RPKM: 12.4
Median RPKM: 108.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
151.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
148.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
142.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
139.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
139.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
137.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
137.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
134.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
133.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
132.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
132.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
130.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
130.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
130.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
128.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
128.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
126.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
126.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
126.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
126.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
125.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
125.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
125.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
125.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
125.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
124.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
124.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
124.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
123.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
123.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
122.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
122.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
121.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
120.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
120.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
120.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
119.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
119.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
119.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
118.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
118.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
118.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
118.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
118.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
117.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
117.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
117.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
116.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
116.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
116.8
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
116.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
116.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
116.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
116.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
115.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
115.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
115.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
115.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
115.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
115.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
115.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
115.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
115.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
114.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
114.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
113.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
113.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
113.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
113.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
113.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
112.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
112.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
112.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
112.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
112.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
112.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
112.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
112.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
111.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
111.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
111.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
111.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
111.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
110.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
110.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
110.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
110.4
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
110.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
110.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
110.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
110.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
109.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
109.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
109.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
109.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
109.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
109.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
109.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
109.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
109.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
109.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
109.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
109.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
108.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
108.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
108.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
108.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
108.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
108.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
107.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
107.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
107.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
107.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
107.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
107.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
107.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
106.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
106.8
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
106.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
106.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
106.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
106.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
106.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
106.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
105.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
105.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
105.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
105.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
105.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
105.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
105.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
104.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
104.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
104.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
104.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
104.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
103.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
103.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
103.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
103.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
103.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
102.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
102.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
102.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
102.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
102.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
102.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
101.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
101.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
101.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
101.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
101.1
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
101.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
100.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
100.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
100.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
100.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
100.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
100.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
99.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
99.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
99.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
99.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
99.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
99.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
99.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
99.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
98.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
98.5
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
98.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
98.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
97.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
97.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
97.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
97.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
97.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
96.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
96.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
96.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
96.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
96.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
96.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
96.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
96.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
96.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
95.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
95.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
94.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
94.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
94.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
94.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
94.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
94.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
93.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
93.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
93.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
93.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
93.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
92.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
92.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
91.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
91.7
GTEX-11OF3-1926-SM-59889
60-69 years, male
91.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
90.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
90.7
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
90.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
90.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
88.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
88.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
87.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
86.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
86.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
84.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
79.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.