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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 178.7
Min RPKM: 4.6
Std RPKM: 39.4
Median RPKM: 66.0
GTEX-ZTSS-0926-SM-59865
40-49 years, male
178.7
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
152.4
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
144.9
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
136.6
GTEX-111YS-1426-SM-5GID8
60-69 years, male
135.4
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
125.5
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
121.0
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
120.8
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
120.2
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
113.4
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
112.6
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
111.3
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
110.2
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
110.1
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
109.3
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
109.1
GTEX-1122O-1326-SM-5H11F
60-69 years, female
107.6
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
106.0
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
105.9
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
104.6
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
104.5
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
102.8
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
102.4
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
98.1
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
97.6
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
96.3
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
95.6
GTEX-13113-1226-SM-5EGHT
60-69 years, female
95.0
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
91.3
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
89.5
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
85.6
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
85.4
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
84.3
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
84.0
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
80.5
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
77.9
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
74.2
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
74.1
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
73.1
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
70.8
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
69.1
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
68.7
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
68.5
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
66.4
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
65.6
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
65.3
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
64.2
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
63.5
GTEX-13O61-1326-SM-5KM31
60-69 years, male
62.0
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
59.3
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
58.9
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
58.4
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
57.8
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
55.0
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
54.6
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
54.0
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
53.6
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
52.9
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
47.2
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
45.5
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
45.3
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
43.4
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
43.3
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
42.2
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
41.0
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
40.1
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
34.4
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
32.5
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
30.0
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
29.8
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
29.1
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
26.8
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
26.2
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
25.1
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
22.8
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
22.7
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
21.6
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
19.0
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
18.7
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
14.1
GTEX-1192X-2526-SM-59868
50-59 years, male
13.7
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
8.3
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
8.2
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
6.7
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
6.7
GTEX-117YX-0326-SM-5GICL
50-59 years, male
5.7
GTEX-13111-1426-SM-5DUW3
50-59 years, male
5.3
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
4.6
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
