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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 44
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 84.9
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 57
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 80
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 76.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 370.4
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 52.3
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 63.1
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 300.1
Min RPKM: 4.0
Std RPKM: 57.5
Median RPKM: 91.1
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
300.1
GTEX-R53T-0326-SM-48FEC
50-59 years, female
274.0
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
246.0
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
200.2
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
191.8
GTEX-RN64-1826-SM-48FDV
50-59 years, male
188.5
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
183.6
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
178.4
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
176.9
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
174.6
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
172.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
172.0
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
169.2
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
168.8
GTEX-YECK-1926-SM-4W21H
60-69 years, male
167.4
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
167.0
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
163.2
GTEX-13113-1326-SM-5GCOI
60-69 years, female
161.3
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
160.9
GTEX-11GSP-0626-SM-5986T
60-69 years, female
156.3
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
148.4
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
145.5
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
144.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
144.7
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
143.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
140.6
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
139.1
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
138.9
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
138.8
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
137.8
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
136.1
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
134.9
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
130.5
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
129.0
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
128.4
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
126.9
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
125.0
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
122.0
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
121.9
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
121.3
GTEX-1399T-0826-SM-5IFES
60-69 years, male
118.2
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
117.7
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
116.6
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
115.4
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
115.2
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
113.1
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
112.0
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
110.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
108.1
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
106.7
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
105.3
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
101.5
GTEX-13112-1426-SM-5EGH8
50-59 years, male
99.3
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
97.5
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
95.1
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
93.4
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
93.2
GTEX-QESD-2026-SM-447BI
20-29 years, male
92.3
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
91.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
91.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
90.7
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
89.9
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
88.5
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
86.9
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
83.7
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
82.9
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
82.0
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
81.8
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
80.4
GTEX-P78B-1326-SM-3P611
40-49 years, female
80.3
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
77.4
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
76.1
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
75.2
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
74.8
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
70.0
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
67.5
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
66.4
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
66.3
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
65.8
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
63.8
GTEX-12696-0826-SM-5EGGE
60-69 years, male
63.0
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
61.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
61.4
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
59.1
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
59.1
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
51.0
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
50.9
GTEX-11ZUS-2526-SM-59872
30-39 years, male
50.5
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
50.3
GTEX-X261-1726-SM-4PQYT
50-59 years, male
48.2
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
47.0
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
46.7
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
45.4
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
43.3
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
42.0
GTEX-RU72-1426-SM-46MUF
50-59 years, female
38.3
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
38.2
GTEX-QEL4-1226-SM-447A4
50-59 years, male
37.8
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
37.7
GTEX-Q734-0326-SM-48U15
40-49 years, female
33.7
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
33.5
GTEX-S33H-1626-SM-4AD68
30-39 years, male
32.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
32.7
GTEX-REY6-1226-SM-48FDR
60-69 years, male
30.6
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
30.2
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
30.0
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
27.3
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
27.0
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
26.0
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
22.9
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
22.4
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
20.9
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
18.8
GTEX-S32W-1926-SM-4AD63
50-59 years, female
18.4
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
16.4
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
14.7
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
13.2
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
12.8
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
4.0
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
