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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 389.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 48.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 90
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 683.3
Min RPKM: 30.4
Std RPKM: 83.8
Median RPKM: 127.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
683.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
491.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
413.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
327.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
326.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
319.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
314.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
301.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
300.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
297.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
292.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
292.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
277.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
276.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
274.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
273.8
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
273.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
272.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
263.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
262.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
259.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
255.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
255.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
243.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
243.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
243.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
240.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
223.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
220.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
220.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
218.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
217.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
216.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
215.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
214.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
212.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
210.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
207.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
205.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
205.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
201.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
200.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
198.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
196.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
195.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
195.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
195.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
195.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
194.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
194.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
193.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
192.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
190.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
188.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
186.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
184.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
183.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
181.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
180.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
179.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
179.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
178.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
177.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
177.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
176.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
174.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
173.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
172.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
171.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
169.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
166.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
164.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
164.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
161.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
160.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
157.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
154.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
153.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
151.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
150.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
148.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
148.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
147.8
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
147.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
146.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
145.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
142.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
141.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
141.4
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
140.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
140.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
139.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
139.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
138.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
138.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
135.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
134.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
134.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
134.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
134.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
133.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
133.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
132.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
131.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
129.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
128.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
128.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
125.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
125.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
125.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
122.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
122.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
121.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
121.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
120.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
120.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
119.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
119.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
119.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
119.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
118.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
118.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
118.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
116.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
116.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
115.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
114.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
114.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
113.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
113.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
111.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
111.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
110.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
109.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
108.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
108.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
108.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
108.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
108.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
107.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
107.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
106.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
103.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
102.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
100.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
98.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
97.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
97.6
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
96.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
95.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
95.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
95.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
93.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
90.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
88.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
87.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
87.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
87.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
86.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
86.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
86.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
86.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
85.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
85.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
84.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
84.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
83.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
82.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
82.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
81.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
81.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
75.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
74.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
72.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
72.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
72.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
71.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
70.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
70.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
69.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
69.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
69.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
68.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
67.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
67.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
67.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
67.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
67.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
66.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
65.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
63.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
62.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
60.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
58.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
58.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
57.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
56.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
55.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
54.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
53.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
52.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
51.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
47.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
46.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
46.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
45.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
41.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
38.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
35.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
35.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
34.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
33.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
33.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
30.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.