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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 399.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 319.5
Min RPKM: 113.9
Std RPKM: 40.2
Median RPKM: 229.5
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
319.5
GTEX-X585-3026-SM-46MWF
50-59 years, male
316.4
GTEX-WL46-2926-SM-3LK82
50-59 years, male
295.6
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
292.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
289.6
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
287.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
282.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
279.2
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
277.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
273.8
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
270.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
269.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
268.5
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
268.4
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
267.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
266.8
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
265.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
264.2
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
263.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
262.7
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
260.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
257.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
257.2
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
256.7
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
255.9
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
254.8
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
253.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
251.4
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
250.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
250.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
250.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
249.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
248.1
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
247.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
246.7
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
246.3
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
246.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
246.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
246.0
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
245.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
244.7
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
243.8
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
242.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
242.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
241.3
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
241.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
240.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
238.6
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
238.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
236.6
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
235.1
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
234.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
233.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
232.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
231.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
231.1
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
231.0
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
228.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
227.2
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
227.0
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
225.7
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
224.2
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
222.9
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
222.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
222.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
221.1
GTEX-11PRG-2926-SM-5987A
50-59 years, male
220.7
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
217.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
216.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
216.5
GTEX-1128S-2726-SM-5H12C
60-69 years, female
215.7
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
215.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
213.1
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
208.8
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
208.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
207.5
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
206.1
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
202.9
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
202.7
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
202.0
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
201.8
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
201.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
200.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
199.7
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
197.7
GTEX-144FL-3026-SM-5O99C
50-59 years, male
197.0
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
195.9
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
193.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
192.8
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
189.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
188.6
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
187.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
186.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
183.2
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
181.9
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
175.1
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
173.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
168.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
164.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
163.8
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
163.7
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
161.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
161.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
160.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
160.3
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
160.2
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
159.6
GTEX-11GSP-3226-SM-5986O
60-69 years, female
159.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
159.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
158.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
158.7
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
154.3
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
149.1
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
113.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 219.1
Samples: 108
Max RPKM: 391.5
Min RPKM: 105.4
Std RPKM: 50.2
Median RPKM: 223.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
391.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
372.2
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
332.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
323.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
312.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
282.2
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
279.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
277.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
276.8
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
276.4
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
270.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
269.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
268.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
267.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
260.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
259.4
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
259.1
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
259.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
257.2
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
256.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
256.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
253.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
252.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
250.5
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
248.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
247.4
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
247.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
246.6
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
246.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
246.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
244.4
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
243.5
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
242.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
241.7
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
239.7
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
239.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
238.8
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
238.5
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
238.2
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
234.8
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
233.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
233.1
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
231.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
230.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
230.0
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
229.6
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
228.7
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
228.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
227.7
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
226.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
225.6
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
224.4
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
224.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
223.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
223.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
222.8
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
221.7
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
221.6
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
220.2
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
220.1
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
218.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
215.6
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
214.4
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
213.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
213.5
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
212.1
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
211.8
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
211.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
205.6
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
205.2
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
205.0
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
204.7
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
204.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
202.1
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
200.4
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
199.8
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
198.4
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
197.5
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
197.2
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
195.4
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
192.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
192.1
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
188.9
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
188.0
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
187.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
185.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
184.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
180.6
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
178.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
171.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
167.9
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
164.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
161.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
160.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
156.2
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
149.2
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
144.2
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
141.7
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
137.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
135.2
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
134.6
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
134.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
129.4
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
127.6
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
127.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
124.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
111.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
105.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.