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USF2
COLON - Expression summary
RNA expressioni
HPA:74.0TPM
GTEx:40.0RPKM
FANTOM5:70.3Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 74.0
overview Male, age 54 Sample 1
TPM: 83.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 133.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 119
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 83.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 131.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 45.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 51.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 46.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 51.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 56.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 62.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 43.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 53.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 40.0
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 46.0
Samples: 149

Max RPKM: 78.5
Min RPKM: 22.6
Std RPKM: 9.7
Median RPKM: 45.3
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 78.5
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 72.2
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 69.0
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 67.5
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 67.3
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 67.0
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 64.5
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 64.1
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 63.9
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 63.4
Show all
Colon - Transverse
RPKM: 35.5
Samples: 196

Max RPKM: 60.3
Min RPKM: 17.5
Std RPKM: 7.2
Median RPKM: 34.1
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 60.3
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 58.0
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 56.5
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 55.3
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 55.1
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 53.7
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 52.2
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 50.3
GTEX-117YX-0826-SM-5H11J 50-59 years, male 49.7
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 49.7
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 70.3
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 64.5
FF:10014-101C5 62,83,84 years, mixed 70.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.