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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 401
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 402.3
Min RPKM: 68.9
Std RPKM: 73.8
Median RPKM: 262.4
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
402.3
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
398.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
381.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
374.9
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
357.6
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
356.7
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
355.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
348.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
345.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
343.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
343.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
328.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
326.5
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
326.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
325.0
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
323.6
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
323.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
316.1
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
311.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
310.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
310.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
308.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
307.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
304.5
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
303.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
302.7
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
302.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
302.5
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
301.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
301.0
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
297.7
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
297.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
295.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
293.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
292.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
291.9
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
290.6
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
289.3
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
287.4
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
286.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
285.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
284.8
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
281.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
279.6
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
274.5
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
273.3
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
272.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
269.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
269.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
268.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
267.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
267.5
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
266.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
265.5
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
265.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
265.4
GTEX-145MF-2726-SM-5O995
50-59 years, male
262.7
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
262.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
261.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
261.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
261.0
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
259.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
257.6
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
256.6
GTEX-11PRG-2926-SM-5987A
50-59 years, male
253.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
251.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
250.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
245.2
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
236.2
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
236.0
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
230.1
GTEX-1128S-2726-SM-5H12C
60-69 years, female
226.7
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
221.3
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
220.0
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
218.8
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
214.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
213.2
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
212.7
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
210.3
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
208.5
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
206.3
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
205.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
204.7
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
203.8
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
200.2
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
195.0
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
188.5
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
184.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
183.3
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
182.3
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
180.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
179.5
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
169.6
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
165.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
159.6
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
159.2
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
158.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
157.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
154.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
152.5
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
146.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
146.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
139.8
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
138.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
134.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
133.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
131.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
131.4
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
111.0
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
95.9
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
93.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
93.3
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
82.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
68.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 219.7
Samples: 108
Max RPKM: 401.2
Min RPKM: 76.1
Std RPKM: 81.9
Median RPKM: 234.1
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
401.2
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
398.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
372.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
352.8
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
347.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
343.3
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
342.2
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
338.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
338.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
333.7
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
329.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
328.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
323.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
318.3
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
307.8
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
307.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
304.8
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
304.6
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
299.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
295.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
295.3
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
288.5
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
280.8
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
280.1
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
278.4
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
276.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
276.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
274.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
274.0
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
272.6
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
272.2
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
271.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
265.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
262.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
259.8
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
259.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
257.2
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
256.8
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
256.0
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
255.7
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
254.7
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
251.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
248.5
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
248.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
246.2
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
243.0
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
242.6
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
238.9
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
238.6
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
237.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
236.3
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
235.8
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
235.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
234.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
233.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
233.3
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
232.9
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
225.7
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
225.1
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
223.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
222.1
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
221.9
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
221.7
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
207.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
206.9
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
205.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
200.7
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
194.0
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
191.9
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
189.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
188.8
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
180.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
177.1
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
173.3
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
172.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
170.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
169.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
166.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
165.9
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
160.5
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
155.6
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
152.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
151.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
148.9
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
146.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
135.9
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
132.7
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
118.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
118.5
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
115.3
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
114.4
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
114.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
113.1
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
113.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
108.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
108.3
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
106.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
92.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
91.5
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
91.0
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
87.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
82.0
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
81.4
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
80.4
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
80.2
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
78.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
77.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
76.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.