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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 239
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 207.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 105.5
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 440.6
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 423.9
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 268.7
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 128.9
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 234
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 240
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 355.6
Min RPKM: 39.6
Std RPKM: 65.2
Median RPKM: 196.3
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
355.6
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
352.8
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
327.2
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
326.5
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
323.0
GTEX-13112-0226-SM-5P9IV
50-59 years, male
318.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
314.1
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
304.0
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
297.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
294.7
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
293.4
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
290.5
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
289.4
GTEX-Y111-2426-SM-4TT23
50-59 years, male
289.0
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
286.9
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
285.9
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
279.5
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
279.3
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
277.8
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
274.6
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
272.3
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
271.9
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
267.5
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
260.8
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
259.5
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
259.0
GTEX-REY6-0126-SM-48FDT
60-69 years, male
257.3
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
256.0
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
255.7
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
254.9
GTEX-12696-0226-SM-5EGL3
60-69 years, male
254.5
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
254.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
253.8
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
251.8
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
247.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
247.2
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
245.2
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
244.9
GTEX-117XS-2026-SM-5GID1
60-69 years, male
244.7
GTEX-13111-1526-SM-5EGJX
50-59 years, male
244.6
GTEX-11OF3-1826-SM-5987N
60-69 years, male
243.9
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
242.9
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
242.8
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
240.5
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
240.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
239.3
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
238.5
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
238.3
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
235.0
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
234.3
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
233.6
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
233.3
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
233.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
231.9
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
230.9
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
230.2
GTEX-S95S-1126-SM-4B64E
60-69 years, male
227.5
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
224.8
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
223.0
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
222.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
222.1
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
219.8
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
215.7
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
214.2
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
214.2
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
213.5
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
212.1
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
211.8
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
211.8
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
211.6
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
210.1
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
208.4
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
207.9
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
207.8
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
206.3
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
206.0
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
205.1
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
204.7
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
203.7
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
202.7
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
201.3
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
201.0
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
199.2
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
199.0
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
197.6
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
197.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
195.3
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
195.1
GTEX-R55D-0126-SM-48FEL
50-59 years, male
194.8
GTEX-V955-1926-SM-4KL1L
60-69 years, male
192.7
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
191.9
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
191.6
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
190.6
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
190.4
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
188.8
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
188.3
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
185.7
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
184.2
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
183.8
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
183.0
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
182.9
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
182.5
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
181.8
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
181.8
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
179.3
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
177.9
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
177.8
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
174.1
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
173.8
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
173.1
GTEX-QLQW-1026-SM-447A9
30-39 years, male
172.7
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
171.9
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
171.3
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
170.4
GTEX-R55C-1426-SM-48FED
40-49 years, male
169.7
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
165.7
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
165.2
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
164.6
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
162.4
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
161.9
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
160.8
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
159.6
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
157.2
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
156.1
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
155.6
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
153.3
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
151.3
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
147.2
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
145.7
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
144.3
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
142.8
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
141.9
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
139.1
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
137.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
137.4
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
136.1
GTEX-X261-2326-SM-4PQYU
50-59 years, male
136.1
GTEX-XPT6-1626-SM-4B655
20-29 years, male
135.6
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
135.5
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
135.4
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
134.3
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
127.0
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
126.8
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
126.2
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
125.5
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
123.9
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
121.9
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
120.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
118.2
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
117.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
116.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
113.1
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
106.5
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
103.2
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
102.2
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
100.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
98.1
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
97.0
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
96.0
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
93.5
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
87.8
GTEX-RN64-2326-SM-48FDW
50-59 years, male
84.8
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
83.8
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
82.2
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
82.2
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
80.2
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
79.8
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
77.0
GTEX-S33H-0126-SM-4AD62
30-39 years, male
70.9
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
59.1
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
56.4
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
39.6
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.