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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 386.4
Min RPKM: 49.7
Std RPKM: 68.9
Median RPKM: 176.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
386.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
341.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
309.5
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
302.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
300.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
289.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
286.3
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
280.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
280.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
277.4
GTEX-144GN-2126-SM-5O99D
50-59 years, male
267.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
267.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
263.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
262.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
260.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
258.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
257.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
253.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
247.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
246.7
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
246.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
245.9
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
245.5
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
244.3
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
243.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
242.6
GTEX-QLQW-0126-SM-447BK
30-39 years, male
240.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
239.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
231.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
230.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
227.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
225.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
221.2
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
217.4
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
217.0
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
213.1
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
211.7
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
211.5
GTEX-QCQG-0226-SM-48U28
50-59 years, female
203.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
202.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
200.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
198.2
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
197.9
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
197.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
195.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
190.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
189.6
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
184.2
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
181.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
179.6
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
179.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
177.9
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
174.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
172.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
171.9
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
171.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
170.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
167.3
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
161.2
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
159.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
156.9
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
156.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
154.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
151.5
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
151.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
150.1
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
149.3
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
148.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
146.1
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
142.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
140.8
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
140.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
140.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
139.6
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
139.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
138.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
136.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
135.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
130.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
129.2
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
127.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
123.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
123.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
119.6
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
119.1
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
116.4
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
114.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
114.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
109.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
104.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
102.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
91.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
90.6
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
87.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
86.4
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
86.1
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
82.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
81.9
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
81.3
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
76.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
74.1
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
61.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
60.2
GTEX-Q734-0226-SM-48U1A
40-49 years, female
49.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.